RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 FETUBQ9UGM5 382 aa7.65□□□□□ -1.18
VTI1A-201ENST00000393077 SEPT9Q9UHD8 586 aaPredicted RBP7.65□□□□□ -1.18
VTI1A-201ENST00000393077 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 EFCAB9A8MZ26 197 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 PROSCO94903 275 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ECDO95905 644 aaPredicted RBP7.65□□□□□ -1.19
VTI1A-201ENST00000393077 HMGN1P05114 100 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 FGFR1P11362 822 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 CYP3A5P20815 502 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 RPS3P23396 243 aaKnown RBP eCLIP7.65□□□□□ -1.19
VTI1A-201ENST00000393077 MYF6P23409 242 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 YWHABP31946 246 aaKnown RBP7.65□□□□□ -1.19
VTI1A-201ENST00000393077 GABRB2P47870 512 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 VAMP7P51809 220 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 SKIV2LQ15477 1246 aaKnown RBP7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF568Q3ZCX4 644 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 EPC2Q52LR7 807 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 FAM102BQ5T8I3 360 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ANGEL2Q5VTE6 544 aaKnown RBP7.65□□□□□ -1.19
VTI1A-201ENST00000393077 APOBEC3HQ6NTF7 200 aaKnown RBP7.65□□□□□ -1.19
VTI1A-201ENST00000393077 SCYL2Q6P3W7 929 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ADAMTSL2Q86TH1 951 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 TTLQ8NG68 377 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ADAM32Q8TC27 787 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ACTL9Q8TC94 416 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF384Q8TF68 577 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 GIMAP5Q96F15 307 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ELMO2Q96JJ3 720 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF641Q96N77 438 aaPredicted RBP7.65□□□□□ -1.19
VTI1A-201ENST00000393077 COPS4Q9BT78 406 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF416Q9BWM5 594 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 VPS33BQ9H267 617 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 KCNN2Q9H2S1 579 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 TASP1Q9H6P5 420 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 KRT84Q9NSB2 600 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 DCAF16Q9NXF7 216 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF222Q9UK12 451 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF175Q9Y473 711 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 PCDHB4Q9Y5E5 795 aa7.65□□□□□ -1.19
VTI1A-201ENST00000393077 ASTN2O75129 1339 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 DENND3A2RUS2 1198 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 LIASO43766 372 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 HS6ST1O60243 411 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 FAM155BO75949 473 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 GNAO1P09471 354 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 CD19P15391 556 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 TAL1P17542 331 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 TPMTP51580 245 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 PLA2G16P53816 162 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 ERVFC1P60507 584 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 GPLD1P80108 840 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 GALK2Q01415 458 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 PRKAA1Q13131 559 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 GPR68Q15743 365 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 SUPT20HL1Q3ZLR7 823 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 MZT2BQ6NZ67 158 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 DCLRE1AQ6PJP8 1040 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 COMMD7Q86VX2 200 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 SLC9A9Q8IVB4 645 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 C10orf107Q8IVU9 208 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 UBE2J2Q8N2K1 259 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 TTC16Q8NEE8 873 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 BIRC7Q96CA5 298 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 UROC1Q96N76 676 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 USB1Q9BQ65 265 aaKnown RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 SLC25A23Q9BV35 468 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 RACGAP1Q9H0H5 632 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 ARHGEF4Q9NR80 690 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 MPP6Q9NZW5 540 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 SLIT2O94813 1529 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 PRR23D1E9PI22 279 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 BTN3A1O00481 513 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 UBDO15205 165 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 AIREO43918 545 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 ENTPD3O75355 529 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 PRR23D2P0DMB1 279 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 BMP4P12644 408 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 TNNI1P19237 187 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 PSMA2P25787 234 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 CNTFP26441 200 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 ARNTP27540 789 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF45Q02386 682 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 TNK2Q07912 1038 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 LGALS3BPQ08380 585 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 C19orf57Q0VDD7 668 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 CLCA4Q14CN2 919 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 C21orf62-AS1Q17RA5 79 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 CCDC142Q17RM4 750 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 FUT11Q495W5 492 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 BRDTQ58F21 947 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 TOR2AQ5JU69 321 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 FNBP1LQ5T0N5 605 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 MPP7Q5T2T1 576 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 ALG1LQ6GMV1 187 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 FAM160B2Q86V87 743 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 RELL1Q8IUW5 271 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 HID1Q8IV36 788 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 LGI2Q8N0V4 545 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 LILRA2Q8N149 483 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms