RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 ZSWIM9Q86XI8 627 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 DCP2Q8IU60 420 aaKnown RBP6.79□□□□□ -1.32
UBBP1-201ENST00000392399 KLHDC8BQ8IXV7 354 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 CBARPQ8N350 705 aaPredicted RBP6.79□□□□□ -1.32
UBBP1-201ENST00000392399 PRELID2Q8N945 189 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 FAM71DQ8N9W8 422 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 MFSD2AQ8NA29 543 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 C12orf50Q8NA57 414 aaPredicted RBP6.79□□□□□ -1.32
UBBP1-201ENST00000392399 SPATA22Q8NHS9 363 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 CCDC110Q8TBZ0 833 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 ATG4AQ8WYN0 398 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 SNX19Q92543 992 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 MAGOHBQ96A72 148 aaKnown RBP6.79□□□□□ -1.32
UBBP1-201ENST00000392399 RMDN1Q96DB5 314 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 TRIB3Q96RU7 358 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 WDR24Q96S15 920 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 PHOX2BQ99453 314 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 FAM118BQ9BPY3 351 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 ORAI3Q9BRQ5 295 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 MIR1-1HGQ9H1L0 117 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 TRABDQ9H4I3 376 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 C10orf88Q9H8K7 445 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 MAGEE1Q9HCI5 957 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 TM9SF3Q9HD45 589 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 SEMA4GQ9NTN9 838 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 TMEM74BQ9NUR3 256 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 PAK5Q9P286 719 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 ZFR2Q9UPR6 939 aaKnown RBP6.79□□□□□ -1.32
UBBP1-201ENST00000392399 CHKBQ9Y259 395 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 CAPN8A6NHC0 703 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 AP3B1O00203 1094 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 FPGTO14772 594 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 VILLO15195 856 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 SLC31A1O15431 190 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 SPINT1O43278 529 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 LZTS3O60299 673 aaPredicted RBP6.78□□□□□ -1.32
UBBP1-201ENST00000392399 DFNA5O60443 496 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 MMP20O60882 483 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 PMPCBO75439 489 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 HEXIM1O94992 359 aaKnown RBP6.78□□□□□ -1.32
UBBP1-201ENST00000392399 MT-CYBP00156 380 aaPredicted RBP6.78□□□□□ -1.32
UBBP1-201ENST00000392399 IFNB1P01574 187 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 FGF1P05230 155 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 ELFN1P0C7U0 828 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 C6P13671 934 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 ITIH2P19823 946 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 TGM1P22735 817 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 CD38P28907 300 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 MAT2AP31153 395 aaKnown RBP6.78□□□□□ -1.32
UBBP1-201ENST00000392399 HNF1BP35680 557 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 FNTAP49354 379 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 TERF1P54274 439 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 YPEL5P62699 121 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 PPP2CBP62714 309 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 PPP2CAP67775 309 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 SPEM2Q0P670 501 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 SNX1Q13596 522 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 TUBB2AQ13885 445 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 LRRC14Q15048 493 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 QPCTQ16769 361 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 TRIM61Q5EBN2 209 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 SEL1L3Q68CR1 1132 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 CRTC1Q6UUV9 634 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 KDELC1Q6UW63 502 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 IL27RAQ6UWB1 636 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 RANBP10Q6VN20 620 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 GSTA5Q7RTV2 222 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 ABI3BPQ7Z7G0 1075 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 LINC00523Q86TU6 105 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 CREG2Q8IUH2 290 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 NRSN1Q8IZ57 195 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 OXR1Q8N573 874 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.78□□□□□ -1.32
UBBP1-201ENST00000392399 CCDC89Q8N998 374 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 TMEM145Q8NBT3 493 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 LPCAT1Q8NF37 534 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 CCHCR1Q8TD31 782 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 GRK7Q8WTQ7 553 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 COG1Q8WTW3 980 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 CENPTQ96BT3 561 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 OXNAD1Q96HP4 312 aaPredicted RBP6.78□□□□□ -1.32
UBBP1-201ENST00000392399 MS4A14Q96JA4 679 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 SERAC1Q96JX3 654 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 MRGPRX2Q96LB1 330 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 RUNDC3BQ96NL0 473 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 C19orf43Q9BQ61 176 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 HINFPQ9BQA5 517 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 TUBB2BQ9BVA1 445 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 FSD1LQ9BXM9 530 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 CDH19Q9H159 772 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 LRRC40Q9H9A6 602 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 EBF2Q9HAK2 575 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 ARNT2Q9HBZ2 717 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 CAPN10Q9HC96 672 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 AASDHPPTQ9NRN7 309 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 RAD18Q9NS91 495 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 UBP1Q9NZI7 540 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.78□□□□□ -1.32
UBBP1-201ENST00000392399 HACD3Q9P035 362 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 B4GALT6Q9UBX8 382 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms