RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 GPBAR1Q8TDU6 330 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 ZDHHC1Q8WTX9 485 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 PTCD2Q8WV60 388 aaKnown RBP11.85□□□□□ -0.51
SOD1-202ENST00000389995 SLC45A3Q96JT2 553 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 CATSPER2Q96P56 530 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 NCAPGQ9BPX3 1015 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 MAGEH1Q9H213 219 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 NOL6Q9H6R4 1146 aaKnown RBP11.85□□□□□ -0.51
SOD1-202ENST00000389995 LHX3Q9UBR4 397 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 PILRAQ9UKJ1 303 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 MRPS18BQ9Y676 258 aaKnown RBP11.85□□□□□ -0.51
SOD1-202ENST00000389995 FBN2P35556 2912 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 GOLGA6L4A6NEF3 574 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 A8MU76 341 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 CACNB4O00305 520 aaPredicted RBP11.84□□□□□ -0.51
SOD1-202ENST00000389995 FOXN3O00409 490 aaPredicted RBP11.84□□□□□ -0.51
SOD1-202ENST00000389995 PPM1DO15297 605 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 BUB1BO60566 1050 aaPredicted RBP11.84□□□□□ -0.51
SOD1-202ENST00000389995 RAMP2O60895 175 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 RECQL5O94762 991 aaPredicted RBP11.84□□□□□ -0.51
SOD1-202ENST00000389995 LRIG2O94898 1065 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 FUCA1P04066 466 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 RHOQP17081 205 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 COL8A1P27658 744 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 CSTF2P33240 577 aaKnown RBP eCLIP11.84□□□□□ -0.51
SOD1-202ENST00000389995 ETFBP38117 255 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 MMP12P39900 470 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 MAPKAPK2P49137 400 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 GEMIN4P57678 1058 aaKnown RBP11.84□□□□□ -0.51
SOD1-202ENST00000389995 SNX16P57768 344 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 KIAA1024LP59773 190 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 RAD51Q06609 339 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 KLRB1Q12918 225 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 CYTH1Q15438 398 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 SNAP47Q5SQN1 464 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 TAF3Q5VWG9 929 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 ZNF438Q7Z4V0 828 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 ZNF761Q86XN6 746 aaPredicted RBP11.84□□□□□ -0.51
SOD1-202ENST00000389995 CAMK1DQ8IU85 385 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 ZDHHC17Q8IUH5 632 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 AGBL5Q8NDL9 886 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 APOBEC4Q8WW27 367 aaKnown RBP11.84□□□□□ -0.51
SOD1-202ENST00000389995 C18orf8Q96DM3 657 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 CCDC34Q96HJ3 373 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 CARS2Q9HA77 564 aaKnown RBP11.84□□□□□ -0.51
SOD1-202ENST00000389995 TMEM248Q9NWD8 314 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 APEX2Q9UBZ4 518 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 TMEM59LQ9UK28 342 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 MFHAS1Q9Y4C4 1052 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 ST14Q9Y5Y6 855 aa11.84□□□□□ -0.51
SOD1-202ENST00000389995 PRSS38A1L453 326 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 ENO4A6NNW6 628 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 BIN1O00499 593 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 SEMA7AO75326 666 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 THRAP10827 490 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 CCNB1P14635 433 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 GM2AP17900 193 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 ADRA1BP35368 520 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 GABRB2P47870 512 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 MARSP56192 900 aaKnown RBP11.83□□□□□ -0.52
SOD1-202ENST00000389995 RALGDSQ12967 914 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 DCAF12Q5T6F0 453 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 ZNF787Q6DD87 383 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 ERAP2Q6P179 960 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 SLC30A9Q6PML9 568 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 C17orf82Q86X59 251 aaPredicted RBP11.83□□□□□ -0.52
SOD1-202ENST00000389995 PYROXD2Q8N2H3 581 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 CCDC185Q8N715 623 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 KIAA1524Q8TCG1 905 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 RTP4Q96DX8 246 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 DDA1Q9BW61 102 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 PDCL3Q9H2J4 239 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 SUV39H2Q9H5I1 410 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 APMAPQ9HDC9 416 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 SIX2Q9NPC8 291 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 METTL5Q9NRN9 209 aaKnown RBP11.83□□□□□ -0.52
SOD1-202ENST00000389995 TAAR2Q9P1P5 351 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 ATP8A1Q9Y2Q0 1164 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 PLEKHM1Q9Y4G2 1056 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 C2CD3Q4AC94 2353 aa11.83□□□□□ -0.52
SOD1-202ENST00000389995 TRBV23OR9-2A0A075B6M9 112 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 IGHV1OR21-1A0A087WYE8 117 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 CXorf51AA0A1B0GTR3 108 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 PLEKP08567 350 aaPredicted RBP11.82□□□□□ -0.52
SOD1-202ENST00000389995 PON1P27169 355 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 GNPDA1P46926 289 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 RGRP47804 291 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 PPM1FP49593 454 aaPredicted RBP11.82□□□□□ -0.52
SOD1-202ENST00000389995 BIRC2Q13490 618 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 NR1D2Q14995 579 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 AGERQ15109 404 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 CFAP58Q5T655 872 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 ACBD5Q5T8D3 534 aaPredicted RBP11.82□□□□□ -0.52
SOD1-202ENST00000389995 CAPRIN2Q6IMN6 1127 aaKnown RBP11.82□□□□□ -0.52
SOD1-202ENST00000389995 KDELC2Q7Z4H8 507 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 NLGN4XQ8N0W4 816 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 NAGSQ8N159 534 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 BMPERQ8N8U9 685 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 TEX19Q8NA77 164 aa11.82□□□□□ -0.52
SOD1-202ENST00000389995 TMEM35BQ8NCS4 154 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms