RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 LPOP22079 712 aaPredicted RBP26.89■■□□□ 1.9
MSX1-201ENST00000382723 GP5P40197 560 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 SERPINB9P50453 376 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 CTBP1Q13363 440 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 EMC10Q5UCC4 262 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 EGFLAMQ63HQ2 1017 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 NEPROQ6NW34 567 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 NUDT18Q6ZVK8 323 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 LYSMD3Q7Z3D4 306 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 OTUD6BQ8N6M0 293 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 KDM1BQ8NB78 822 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 ATXN7L3BQ96GX2 97 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 BPIFA1Q9NP55 256 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 NLE1Q9NVX2 485 aaPredicted RBP26.89■■□□□ 1.9
MSX1-201ENST00000382723 POLR3BQ9NW08 1133 aaPredicted RBP26.89■■□□□ 1.9
MSX1-201ENST00000382723 HCN2Q9UL51 889 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 PHTF1Q9UMS5 762 aa26.89■■□□□ 1.9
MSX1-201ENST00000382723 RPP40O75818 363 aaKnown RBP26.88■■□□□ 1.89
MSX1-201ENST00000382723 ASGR2P07307 311 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 ABCG1P45844 678 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 SEMG2Q02383 582 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 ACVR1Q04771 509 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 HNRNPA1L2Q32P51 320 aaKnown RBP26.88■■□□□ 1.89
MSX1-201ENST00000382723 POM121L1PQ3SYA9 428 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 ZNF470Q6ECI4 717 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 C4orf33Q8N1A6 199 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 PLCD3Q8N3E9 789 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 TTC30BQ8N4P2 665 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 PEX13Q92968 403 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 ERLEC1Q96DZ1 483 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 ACOX2Q99424 681 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 KLF6Q99612 283 aaPredicted RBP26.88■■□□□ 1.89
MSX1-201ENST00000382723 EDDM13A0A1B0GTR0 161 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 MT-ND3P03897 115 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 IL12RB1P42701 662 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 LRRC73Q5JTD7 316 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 KDM7AQ6ZMT4 941 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 STK40Q8N2I9 435 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 FAM167BQ9BTA0 163 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 TMEM245Q9H330 911 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 CACNA2D2Q9NY47 1150 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 THAP10Q9P2Z0 257 aaPredicted RBP26.88■■□□□ 1.89
MSX1-201ENST00000382723 RIMKLBQ9ULI2 386 aa26.88■■□□□ 1.89
MSX1-201ENST00000382723 HMX2A2RU54 273 aa26.87■■□□□ 1.89
MSX1-201ENST00000382723 GOLGA8RI6L899 631 aa26.87■■□□□ 1.89
MSX1-201ENST00000382723 SLC7A4O43246 635 aa26.87■■□□□ 1.89
MSX1-201ENST00000382723 SIN3BO75182 1162 aa26.87■■□□□ 1.89
MSX1-201ENST00000382723 BRAFP15056 766 aa26.87■■□□□ 1.89
MSX1-201ENST00000382723 SLC1A2P43004 574 aa26.87■■□□□ 1.89
MSX1-201ENST00000382723 GRTP1Q5TC63 336 aa26.87■■□□□ 1.89
MSX1-201ENST00000382723 TXNDC11Q6PKC3 985 aa26.87■■□□□ 1.89
MSX1-201ENST00000382723 CNTN4Q8IWV2 1026 aa26.87■■□□□ 1.89
MSX1-201ENST00000382723 KCNK9Q9NPC2 374 aa26.87■■□□□ 1.89
MSX1-201ENST00000382723 C1orf232A0A0U1RR37 186 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 CCDC162PA2VCL2 907 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 CAPN8A6NHC0 703 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 SPECC1L-ADORA2AF8WAN1 911 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 STX7O15400 261 aaKnown RBP26.86■■□□□ 1.89
MSX1-201ENST00000382723 GOT2P00505 430 aaKnown RBP26.86■■□□□ 1.89
MSX1-201ENST00000382723 KRT4P19013 534 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 MPP1Q00013 466 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 PDE1BQ01064 536 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 C9orf64Q5T6V5 341 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 CDKN2AIPNLQ96HQ2 116 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 SERAC1Q96JX3 654 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 SMC6Q96SB8 1091 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 MFSD1Q9H3U5 465 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 HEBP1Q9NRV9 189 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 NSMCE4AQ9NXX6 385 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 FNDC3AQ9Y2H6 1198 aaKnown RBP26.86■■□□□ 1.89
MSX1-201ENST00000382723 PRUNE2Q8WUY3 3088 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 CTHP32929 405 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 SEC13P55735 322 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 SMAD2Q15796 467 aaKnown RBP26.86■■□□□ 1.89
MSX1-201ENST00000382723 NDUFAF2Q8N183 169 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 PNPLA1Q8N8W4 532 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 RBBP8Q99708 897 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 ZFYVE1Q9HBF4 777 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 SENP1Q9P0U3 644 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 ACTL7BQ9Y614 415 aa26.86■■□□□ 1.89
MSX1-201ENST00000382723 BPTFQ12830 3046 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 TICRRQ7Z2Z1 1910 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 NPIPB15A6NHN6 443 aaPredicted RBP26.85■■□□□ 1.89
MSX1-201ENST00000382723 SPAG7O75391 227 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 CLDN7O95471 211 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 ITGA2BP08514 1039 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 CNTFP26441 200 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 USP45Q70EL2 814 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 TSPAN33Q86UF1 283 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 ARFGAP2Q8N6H7 521 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 MDM1Q8TC05 714 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 CALML6Q8TD86 181 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 EID2BQ96D98 161 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 MTBPQ96DY7 904 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 SCRN2Q96FV2 425 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 OSBPL1AQ9BXW6 950 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 PKP3Q9Y446 797 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 PIAS3Q9Y6X2 628 aa26.85■■□□□ 1.89
MSX1-201ENST00000382723 EPHX1P07099 455 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 SPRP35270 261 aaPredicted RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms