RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TECRLQ5HYJ1 363 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 LINC00523Q86TU6 105 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 PPHLN1Q8NEY8 458 aaKnown RBP16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 EXT2Q93063 718 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 C3orf30Q96M34 536 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 FSD1LQ9BXM9 530 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 NSMCE4AQ9NXX6 385 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 RAD54BQ9Y620 910 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 FAM149AA5PLN7 773 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 MRASO14807 208 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 TRMUO75648 421 aaKnown RBP16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 COL6A2P12110 1019 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 SOX11P35716 441 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 UGP2Q16851 508 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 CHSY3Q70JA7 882 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 SCD5Q86SK9 330 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 PIM3Q86V86 326 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 CARM1Q86X55 608 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 TRIML2Q8N7C3 387 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 TSPAN18Q96SJ8 248 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 GLOD4Q9HC38 313 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 SPAG4Q9NPE6 437 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 OLAHQ9NV23 265 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 OSER1Q9NX31 292 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 SAC3D1A6NKF1 404 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 PPP6CO00743 305 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 TPST1O60507 370 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 AOC2O75106 756 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 ADAMTS4O75173 837 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 PENKP01210 267 aaPredicted RBP16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 SLC10A3P09131 477 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 CCR1P32246 355 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 HSPA13P48723 471 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 GALK1P51570 392 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 RTN4RL1Q86UN2 441 aaPredicted RBP16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 LCA5Q86VQ0 697 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 C2CD4AQ8NCU7 369 aaPredicted RBP16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 RPL10LQ96L21 214 aaKnown RBP16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 ARHGEF38Q9NXL2 777 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 LMCD1Q9NZU5 365 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 PDLIM1O00151 329 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 IRAK2O43187 625 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 MAFKO60675 156 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 ATP6V1B2P21281 511 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 GRIA3P42263 894 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 AIF1P55008 147 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 CDH13P55290 713 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 TMEM259Q4ZIN3 620 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 FAM171BQ6P995 826 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 DCLRE1AQ6PJP8 1040 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 RETREG3Q86VR2 466 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 CANT1Q8WVQ1 401 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 GAB3Q8WWW8 586 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 NT5MQ9NPB1 228 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 TREX1Q9NSU2 369 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 PCDH10Q9P2E7 1040 aa16.31■□□□□ 0.2
NKX3-1-201ENST00000380871 MAGEB3O15480 346 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 IPO13O94829 963 aaKnown RBP16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 MYBPC3Q14896 1274 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 PM20D1Q6GTS8 502 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 NEPROQ6NW34 567 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 SEPT5Q99719 369 aaPredicted RBP16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 ALG9Q9H6U8 611 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 MEAF6Q9HAF1 191 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 UTP6Q9NYH9 597 aaKnown RBP16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 AAR2Q9Y312 384 aaKnown RBP16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 SCAMP3O14828 347 aaKnown RBP16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 CA12O43570 354 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 H6PDO95479 791 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 CHRM3P20309 590 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 SCNN1BP51168 640 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 COG7P83436 770 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 PSMD5Q16401 504 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 FAM83EQ2M2I3 478 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 KRT80Q6KB66 452 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 TMEM207Q6UWW9 146 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 MRPL10Q7Z7H8 261 aaKnown RBP16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 CPNE9Q8IYJ1 553 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 FAM47BQ8NA70 645 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 PGAP3Q96FM1 320 aaPredicted RBP16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 MRGPRX2Q96LB1 330 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 DUS2Q9NX74 493 aaKnown RBP16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 OR51F1A6NGY5 319 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 LRRC14BA6NHZ5 514 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 TMX2-CTNND1H3BSU7 103 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 HTRA2O43464 458 aaPredicted RBP16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 AKAP10O43572 662 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 CACNG3O60359 315 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 GPC4O75487 556 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 SNRPB2P08579 225 aaKnown RBP16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 ALDOCP09972 364 aaKnown RBP16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 TXNL4AP83876 142 aaKnown RBP16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 CREB5Q02930 508 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 STX5Q13190 355 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 SQLEQ14534 574 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 FAM171A1Q5VUB5 890 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 FUNDC1Q8IVP5 155 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 CSNK1G1Q9HCP0 422 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 GMIPQ9P107 970 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 CD300AQ9UGN4 299 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms