RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PNPOQ9NVS9 261 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 ASB3Q9Y575 518 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 ADAMTS4O75173 837 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 FASTKQ14296 549 aaKnown RBP14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 RTP2Q5QGT7 225 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 ATXN7L2Q5T6C5 722 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 HECTD2Q5U5R9 776 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 STYXQ8WUJ0 223 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 SLC2A13Q96QE2 648 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 C17orf80Q9BSJ5 609 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 CXCL16Q9H2A7 254 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 PARVBQ9HBI1 364 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 COPG2Q9UBF2 871 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 TEX264Q9Y6I9 313 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 F8W810 466 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 PITPNM1O00562 1244 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 GRM6O15303 877 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 VAV1P15498 845 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 TAS2R39P59534 338 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 TBL3Q12788 808 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 INSCQ1MX18 579 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 ATP6AP1LQ52LC2 224 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 MS4A13Q5J8X5 152 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 KIAA0408Q6ZU52 694 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 RD3Q7Z3Z2 195 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 C11orf96Q7Z7L8 435 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 DCLRE1BQ9H816 532 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 TMEM216Q9P0N5 145 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 RAP2CQ9Y3L5 183 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 EP400Q96L91 3159 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 TCEA3O75764 348 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 UNC5CO95185 931 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 SOD2P04179 222 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 ACADMP11310 421 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 PKMP14618 531 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 WDR4P57081 412 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 SULT2A1Q06520 285 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 ZBTB17Q13105 803 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 DYNC1I2Q13409 638 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 PHACTR4Q8IZ21 702 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 SH3RF2Q8TEC5 729 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 SEC14L1Q92503 715 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 DDX18Q9NVP1 670 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 GNPTGQ9UJJ9 305 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 GGA2Q9UJY4 613 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 PNMA8BQ9ULN7 279 aaPredicted RBP14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 IFRD1O00458 451 aaPredicted RBP14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 PLIN3O60664 434 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 ADH1CP00326 375 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 CATP04040 527 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 SPDYE7PQ495Y7 208 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 ELMO1Q92556 727 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 ASB2Q96Q27 587 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 C11orf84Q9BUA3 381 aaPredicted RBP14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 ELAC1Q9H777 363 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 POLG2Q9UHN1 485 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 PACSIN3Q9UKS6 424 aa14.22□□□□□ -0.13
SHROOM1-203ENST00000378679 GABRDO14764 452 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 CAPN15O75808 1086 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 FGF18O76093 207 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 SLC10A2Q12908 348 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 KPNB1Q14974 876 aaKnown RBP14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 SPRED3Q2MJR0 410 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 RNF220Q5VTB9 566 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 RBFAQ8N0V3 343 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 ARNTL2Q8WYA1 636 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 LINGO1Q96FE5 620 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 DYRK1BQ9Y463 629 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 TNPO3Q9Y5L0 923 aaKnown RBP14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 TUBGCP6Q96RT7 1819 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 SH3BGRLO75368 114 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 RASSF9O75901 435 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 VCLP18206 1134 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 LRRC74AQ0VAA2 488 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 SFSWAPQ12872 951 aaKnown RBP14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 AASDHQ4L235 1098 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 CLLU1OSQ5K130 101 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 PSRC1Q6PGN9 363 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 IYDQ6PHW0 289 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 SCIMPQ6UWF3 145 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 GET4Q7L5D6 327 aaPredicted RBP14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 TRIM48Q8IWZ4 208 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 BANPQ8N9N5 519 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 BRSK1Q8TDC3 778 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 MARK4Q96L34 752 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 NMRK1Q9NWW6 199 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 SMCHD1A6NHR9 2005 aa14.21□□□□□ -0.13
SHROOM1-203ENST00000378679 GNG14A0A1W2PPG7 69 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 CCDC85CA6NKD9 419 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 SNAP91O60641 907 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 KRT36O76013 467 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 PDE5AO76074 875 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 OAZ2O95190 189 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 FKBP9O95302 570 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 FGF19O95750 216 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 ANXA5P08758 320 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 ALFQ53S48 1182 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 DPY19L2P1Q6NXN4 242 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 FKBP9P1Q75LS8 142 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms