RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 RHPN2P1A8MT19 583 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 SUV39H1O43463 412 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 OR10H3O60404 316 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 SERPINF1P36955 418 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 CDC42EP1Q00587 391 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 ATF7IP2Q5U623 682 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 SLC22A16Q86VW1 577 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 OR5T2Q8NGG2 359 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 TMEM203Q969S6 136 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 SLC30A2Q9BRI3 323 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 TRHDEQ9UKU6 1024 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 AGO2Q9UKV8 859 aaKnown RBP8.76□□□□□ -1.01
LIG3-202ENST00000378526 PLEKHM1Q9Y4G2 1056 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 RPTORQ8N122 1335 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 ZNF35P13682 527 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 KCNJ1P48048 391 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 VEGFCP49767 419 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 CTSWP56202 376 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 RFTN2Q52LD8 501 aaPredicted RBP8.76□□□□□ -1.01
LIG3-202ENST00000378526 TSPAN33Q86UF1 283 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 OR5T3Q8NGG3 340 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 JPH3Q8WXH2 748 aaPredicted RBP8.76□□□□□ -1.01
LIG3-202ENST00000378526 SGCDQ92629 289 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 FNDC11Q9BVV2 318 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 ALDH8A1Q9H2A2 487 aaPredicted RBP8.76□□□□□ -1.01
LIG3-202ENST00000378526 TEX14Q8IWB6 1497 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 TTC34A8MYJ7 566 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 E9PAM4 449 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 CSPG5O95196 566 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 TAF6P49848 677 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 APLP1P51693 650 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 IL31Q6EBC2 164 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 HERC6Q8IVU3 1022 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 REPS2Q8NFH8 660 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 ZFP28Q8NHY6 868 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 SDR42E1Q8WUS8 393 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 CCDC74BQ96LY2 380 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 OR14A2Q96R54 314 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 IFT27Q9BW83 186 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 SLC4A5Q9BY07 1137 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 FKBP7Q9Y680 259 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 RUSC2Q8N2Y8 1516 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 ACEP12821 1306 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 CYP7B1O75881 506 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 TSPAN15O95858 294 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 CERS1P27544 350 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 RAB4BP61018 213 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 IFI35P80217 286 aaPredicted RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 ALG10BQ5I7T1 473 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 MFSD14BQ5SR56 506 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 GADL1Q6ZQY3 521 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 RNF31Q96EP0 1072 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 C8orf48Q96LL4 319 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 GDF3Q9NR23 364 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 TBC1D13Q9NVG8 400 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 MTRRQ9UBK8 725 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 ZNF705FA8MVS1 300 aaPredicted RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 MAP2K7O14733 419 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 OR2B3O76000 313 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 C6orf222P0C671 652 aaPredicted RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 ZNF705DP0CH99 300 aaPredicted RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 ZNF705BP0CI00 300 aaPredicted RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 E2F1Q01094 437 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 MBTD1Q05BQ5 628 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 SYDE2Q5VT97 1194 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 IQSEC1Q6DN90 963 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 CYP20A1Q6UW02 462 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 ACOX2Q99424 681 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 OR10A4Q9H209 315 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 AGPAT5Q9NUQ2 364 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 COPZ2Q9P299 210 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 SUCOQ9UBS9 1254 aaKnown RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 ZMAT5Q9UDW3 170 aaKnown RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 RFX7Q2KHR2 1363 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 NCF1BA6NI72 391 aaPredicted RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 A8MVJ9 347 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 NCF1CA8MVU1 366 aaPredicted RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 ZNF99A8MXY4 864 aaPredicted RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 UGT2B17O75795 530 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 RGS9O75916 674 aaPredicted RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 TM7SF2O76062 418 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 NCF1P14598 390 aaPredicted RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 TAS2R41P59536 307 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 TCEA2Q15560 299 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 KCTD7Q96MP8 289 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 MCMBPQ9BTE3 642 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 TNKS2Q9H2K2 1166 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 TAS2R13Q9NYV9 303 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 SLC35F4A4IF30 521 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 PGAM1P18669 254 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 CD151P48509 253 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 PTGR1Q14914 329 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 LDLRAP1Q5SW96 308 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 XRRA1Q6P2D8 792 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 ZC3H7AQ8IWR0 971 aaKnown RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 TOMM5Q8N4H5 51 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 SEMA6DQ8NFY4 1073 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 RASGRP4Q8TDF6 673 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 PRDM16Q9HAZ2 1276 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 C14orf105Q9NVL8 296 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms