RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 FAXCQ5TGI0 409 aa16.87■□□□□ 0.29
HMGN4-201ENST00000377575 RFX6Q8HWS3 928 aa16.87■□□□□ 0.29
HMGN4-201ENST00000377575 RBFAQ8N0V3 343 aa16.87■□□□□ 0.29
HMGN4-201ENST00000377575 NUS1Q96E22 293 aa16.87■□□□□ 0.29
HMGN4-201ENST00000377575 APOLD1Q96LR9 279 aa16.87■□□□□ 0.29
HMGN4-201ENST00000377575 WDR92Q96MX6 357 aa16.87■□□□□ 0.29
HMGN4-201ENST00000377575 IL12RB2Q99665 862 aa16.87■□□□□ 0.29
HMGN4-201ENST00000377575 KLQ9UEF7 1012 aa16.87■□□□□ 0.29
HMGN4-201ENST00000377575 OR1A2Q9Y585 309 aa16.87■□□□□ 0.29
HMGN4-201ENST00000377575 PCDHA13Q9Y5I0 950 aa16.87■□□□□ 0.29
HMGN4-201ENST00000377575 HEY1Q9Y5J3 304 aa16.87■□□□□ 0.29
HMGN4-201ENST00000377575 PSMD11O00231 422 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 CACNB4O00305 520 aaPredicted RBP16.86■□□□□ 0.29
HMGN4-201ENST00000377575 TPP1O14773 563 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 PPP1R12AO14974 1030 aaPredicted RBP16.86■□□□□ 0.29
HMGN4-201ENST00000377575 HEXIM1O94992 359 aaKnown RBP16.86■□□□□ 0.29
HMGN4-201ENST00000377575 HLA-DQB2P05538 268 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 EPHB1P54762 984 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 KIAA1024LP59773 190 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 E2F1Q01094 437 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 DSC2Q02487 901 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 SLC10A2Q12908 348 aaPredicted RBP16.86■□□□□ 0.29
HMGN4-201ENST00000377575 PDK1Q15118 436 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 HES3Q5TGS1 186 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 ESRP1Q6NXG1 681 aaKnown RBP16.86■□□□□ 0.29
HMGN4-201ENST00000377575 ENPP7Q6UWV6 458 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 TMTC1Q8IUR5 882 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 FSTL5Q8N475 847 aaPredicted RBP16.86■□□□□ 0.29
HMGN4-201ENST00000377575 TPCN2Q8NHX9 752 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 SCRN2Q96FV2 425 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 COQ10AQ96MF6 247 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 MCCC1Q96RQ3 725 aaPredicted RBP16.86■□□□□ 0.29
HMGN4-201ENST00000377575 LRRC61Q9BV99 259 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 WDR26Q9H7D7 661 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 CAAP1Q9H8G2 361 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 DNPEPQ9ULA0 475 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 ZMIZ1Q9ULJ6 1067 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 HYOU1Q9Y4L1 999 aa16.86■□□□□ 0.29
HMGN4-201ENST00000377575 FREM2Q5SZK8 3169 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 FAM149AA5PLN7 773 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 NPIPB15A6NHN6 443 aaPredicted RBP16.85■□□□□ 0.29
HMGN4-201ENST00000377575 LMO7DNF2Z398 122 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 RASGRP1O95267 797 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 GP1BAP07359 652 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 ANXA6P08133 673 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 ALPIP09923 528 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 CTSEP14091 401 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 JUPP14923 745 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 GM2AP17900 193 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 KELP23276 732 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 HK3P52790 923 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 IFI35P80217 286 aaPredicted RBP16.85■□□□□ 0.29
HMGN4-201ENST00000377575 AP1B1Q10567 949 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 ELOCQ15369 112 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 DEFB133Q30KQ1 61 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 DENND2CQ68D51 928 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 C11orf63Q6NUN7 778 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 HID1Q8IV36 788 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.85■□□□□ 0.29
HMGN4-201ENST00000377575 PLA2G15Q8NCC3 412 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 PIH1D2Q8WWB5 315 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 GLMNQ92990 594 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 RNF25Q96BH1 459 aaPredicted RBP16.85■□□□□ 0.29
HMGN4-201ENST00000377575 DTD2Q96FN9 168 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 CALR3Q96L12 384 aaKnown RBP16.85■□□□□ 0.29
HMGN4-201ENST00000377575 LGMNQ99538 433 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 TDRD1Q9BXT4 1180 aaKnown RBP16.85■□□□□ 0.29
HMGN4-201ENST00000377575 BRD8Q9H0E9 1235 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 TCEAL2Q9H3H9 227 aaPredicted RBP16.85■□□□□ 0.29
HMGN4-201ENST00000377575 SALL4Q9UJQ4 1053 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 PNMA8BQ9ULN7 279 aaPredicted RBP16.85■□□□□ 0.29
HMGN4-201ENST00000377575 DOLKQ9UPQ8 538 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 SSUH2Q9Y2M2 353 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.85■□□□□ 0.29
HMGN4-201ENST00000377575 PPIL1Q9Y3C6 166 aa16.85■□□□□ 0.29
HMGN4-201ENST00000377575 SOWAHDA6NJG2 315 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 KCNK1O00180 336 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 FZD6O60353 706 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 NDUFA10O95299 355 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 HOXC4P09017 264 aaPredicted RBP16.84■□□□□ 0.29
HMGN4-201ENST00000377575 TSHRP16473 764 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 ZNF30P17039 623 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 FECHP22830 423 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 LHCGRP22888 699 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 SRP54P61011 504 aaKnown RBP16.84■□□□□ 0.29
HMGN4-201ENST00000377575 RPL26P61254 145 aaKnown RBP16.84■□□□□ 0.29
HMGN4-201ENST00000377575 DYNLT1P63172 113 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 TFDP2Q14188 446 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 ALG11Q2TAA5 492 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 BZW1Q7L1Q6 419 aaKnown RBP16.84■□□□□ 0.29
HMGN4-201ENST00000377575 SDR16C5Q8N3Y7 309 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 LRRN4Q8WUT4 740 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 SCG3Q8WXD2 468 aaKnown RBP16.84■□□□□ 0.29
HMGN4-201ENST00000377575 OLFM3Q96PB7 478 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 CCDC86Q9H6F5 360 aaKnown RBP16.84■□□□□ 0.29
HMGN4-201ENST00000377575 RPL26L1Q9UNX3 145 aaKnown RBP16.84■□□□□ 0.29
HMGN4-201ENST00000377575 ALG6Q9Y672 507 aa16.84■□□□□ 0.29
HMGN4-201ENST00000377575 EPN1Q9Y6I3 576 aaPredicted RBP16.84■□□□□ 0.29
HMGN4-201ENST00000377575 LY6G6EA0A0G2JKS1 128 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 A0A0J9YYE9 177 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms