RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 PGBD3Q8N328 593 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 TTC30BQ8N4P2 665 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 RAB7BQ96AH8 199 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 TRIM56Q9BRZ2 755 aaKnown RBP21.35■■□□□ 1.01
CBWD3-202ENST00000377342 PHACTR1Q9C0D0 580 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 IL22Q9GZX6 179 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 ITM2CQ9NQX7 267 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 FAM86C2PA6NEL3 165 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 SLC7A4O43246 635 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 PLRG1O43660 514 aaKnown RBP21.34■■□□□ 1.01
CBWD3-202ENST00000377342 LDB2O43679 373 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 FAM153BP0C7A2 387 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 VIPR1P32241 457 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 NPY2RP49146 381 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 DMWDQ09019 674 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 CNGA3Q16281 694 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 FAM153CQ494X1 144 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 LRRC66Q68CR7 880 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 CCNI2Q6ZMN8 369 aaPredicted RBP21.34■■□□□ 1.01
CBWD3-202ENST00000377342 KBTBD6Q86V97 674 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 MAML2Q8IZL2 1156 aaPredicted RBP21.34■■□□□ 1.01
CBWD3-202ENST00000377342 NDUFAF2Q8N183 169 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 RANBP9Q96S59 729 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 FOXP3Q9BZS1 431 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 BFARQ9NZS9 450 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 MTRF1LQ9UGC7 380 aaKnown RBP21.34■■□□□ 1.01
CBWD3-202ENST00000377342 ARL5AQ9Y689 179 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 TEX264Q9Y6I9 313 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 ZNF318Q5VUA4 2279 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 C1orf232A0A0U1RR37 186 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 AP1G1O43747 822 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 ELP6Q0PNE2 266 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 PDIA2Q13087 525 aaKnown RBP21.34■■□□□ 1.01
CBWD3-202ENST00000377342 ERAP2Q6P179 960 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 GLT6D1Q7Z4J2 308 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 FAM124AQ86V42 546 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 BRSK1Q8TDC3 778 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 GANCQ8TET4 914 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.34■■□□□ 1.01
CBWD3-202ENST00000377342 HACD3Q9P035 362 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 TCAF1Q9Y4C2 921 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 KCTD3Q9Y597 815 aa21.34■■□□□ 1.01
CBWD3-202ENST00000377342 MROH6A6NGR9 719 aa21.33■■□□□ 1
CBWD3-202ENST00000377342 SLC4A1P02730 911 aa21.33■■□□□ 1
CBWD3-202ENST00000377342 ZNF140P52738 457 aaPredicted RBP21.33■■□□□ 1
CBWD3-202ENST00000377342 SEPT6Q14141 434 aa21.33■■□□□ 1
CBWD3-202ENST00000377342 DNAJC21Q5F1R6 531 aaKnown RBP21.33■■□□□ 1
CBWD3-202ENST00000377342 HP1BP3Q5SSJ5 553 aaPredicted RBP21.33■■□□□ 1
CBWD3-202ENST00000377342 TSSK4Q6SA08 328 aa21.33■■□□□ 1
CBWD3-202ENST00000377342 CENPUQ71F23 418 aa21.33■■□□□ 1
CBWD3-202ENST00000377342 CCDC25Q86WR0 208 aa21.33■■□□□ 1
CBWD3-202ENST00000377342 ZNF778Q96MU6 729 aa21.33■■□□□ 1
CBWD3-202ENST00000377342 TRABDQ9H4I3 376 aa21.33■■□□□ 1
CBWD3-202ENST00000377342 PLAC1Q9HBJ0 212 aa21.33■■□□□ 1
CBWD3-202ENST00000377342 SDR42E2A6NKP2 422 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 EIF3HO15372 352 aaKnown RBP eCLIP21.32■■□□□ 1
CBWD3-202ENST00000377342 BUD23O43709 281 aaKnown RBP21.32■■□□□ 1
CBWD3-202ENST00000377342 CLDN7O95471 211 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 C1SP09871 688 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 CYP2A6P11509 494 aaPredicted RBP21.32■■□□□ 1
CBWD3-202ENST00000377342 GM2AP17900 193 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 ACSL1P33121 698 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 ELK3P41970 407 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 PTPRCAPQ14761 206 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 TAF1AQ15573 450 aaPredicted RBP21.32■■□□□ 1
CBWD3-202ENST00000377342 TMEM52BQ4KMG9 183 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 DTWD2Q8NBA8 298 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 WRAP53Q9BUR4 548 aaKnown RBP21.32■■□□□ 1
CBWD3-202ENST00000377342 KIFC1Q9BW19 673 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 SAYSD1Q9NPB0 183 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 SOX13Q9UN79 622 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 CYP8B1Q9UNU6 501 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 CHMP2BQ9UQN3 213 aa21.32■■□□□ 1
CBWD3-202ENST00000377342 CCDC78A2IDD5 438 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 HEATR9A2RTY3 570 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 C10orf142B7Z368 130 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 ADRA1DP25100 572 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 HOXA6P31267 233 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 STC1P52823 247 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 PTSQ03393 145 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 PCID2Q5JVF3 399 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 LIPIQ6XZB0 460 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 TMC3Q7Z5M5 1100 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 ANKMY2Q8IV38 441 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 C1orf210Q8IVY1 113 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 ZBED8Q8IZ13 594 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 FRMD1Q8N878 549 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 PPHLN1Q8NEY8 458 aaKnown RBP21.31■■□□□ 1
CBWD3-202ENST00000377342 OR14C36Q8NHC7 312 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 RLN3Q8WXF3 142 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 LRRC39Q96DD0 335 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 STAMBPL1Q96FJ0 436 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 SRPK1Q96SB4 655 aaKnown RBP21.31■■□□□ 1
CBWD3-202ENST00000377342 ZFYVE1Q9HBF4 777 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 CHRAC1Q9NRG0 131 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 NCKAP1Q9Y2A7 1128 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 CEP192Q8TEP8 1941 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 IGHV1OR15-9A0A0B4J2B8 117 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 H0Y858 1186 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 SLC34A2O95436 690 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms