RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TAS2R14Q9NYV8 317 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 LOC400499M0QZD8 3231 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 NUDT21O43809 227 aaKnown RBP14.8□□□□□ -0.04
HDAC6-204ENST00000376643 JMJD7P0C870 316 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 TRIM23P36406 574 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 CDH6P55285 790 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 ILF3Q12906 894 aaKnown RBP eCLIP14.8□□□□□ -0.04
HDAC6-204ENST00000376643 PIGHQ14442 188 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-204ENST00000376643 ACOX1Q15067 660 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 DPYSL2Q16555 572 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 OGFOD3Q6PK18 319 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 XKR5Q6UX68 686 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 USP45Q70EL2 814 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 CCNJLQ8IV13 435 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 ARHGAP12Q8IWW6 846 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 ATPAF2Q8N5M1 289 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 NETO2Q8NC67 525 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 FAM46DQ8NEK8 389 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 GPR156Q8NFN8 814 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 IQCDQ96DY2 449 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 NUS1Q96E22 293 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 PDXPQ96GD0 296 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 CMKLR1Q99788 373 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 GSDMCQ9BYG8 508 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 SEPT10Q9P0V9 454 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 ACSL6Q9UKU0 697 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 DNPEPQ9ULA0 475 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 PNMA8BQ9ULN7 279 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-204ENST00000376643 PHTF1Q9UMS5 762 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 SSUH2Q9Y2M2 353 aa14.8□□□□□ -0.04
HDAC6-204ENST00000376643 K7ENP7 123 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 TRAFD1O14545 582 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-204ENST00000376643 ATMINO43313 823 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-204ENST00000376643 LRCH4O75427 683 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 CPP00450 1065 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 PYGLP06737 847 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 MYCLP1P12525 358 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-204ENST00000376643 TEAD1P28347 426 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 RALGDSQ12967 914 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 BIRC2Q13490 618 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 DPYSQ14117 519 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 CA9Q16790 459 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 C14orf28Q4W4Y0 310 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 FIGNQ5HY92 759 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 CERCAMQ5T4B2 595 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 PNCKQ6P2M8 343 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 INO80CQ6PI98 192 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-204ENST00000376643 SHROOM3Q8TF72 1996 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 TEKT4Q8WW24 435 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 FUBP1Q96AE4 644 aaKnown RBP14.79□□□□□ -0.04
HDAC6-204ENST00000376643 PRR11Q96HE9 360 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-204ENST00000376643 NUDCD1Q96RS6 583 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 CCNL2Q96S94 520 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-204ENST00000376643 PEBP4Q96S96 227 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 B3GNT4Q9C0J1 378 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 HSD3B7Q9H2F3 369 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 DPEP2Q9H4A9 486 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 CAAP1Q9H8G2 361 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 CPNE5Q9HCH3 593 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 CWC15Q9P013 229 aaKnown RBP14.79□□□□□ -0.04
HDAC6-204ENST00000376643 RCOR3Q9P2K3 495 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-204ENST00000376643 MOSPD1Q9UJG1 213 aa14.79□□□□□ -0.04
HDAC6-204ENST00000376643 ATXN7L1Q9ULK2 861 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-204ENST00000376643 PRSS38A1L453 326 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 HTRA2O43464 458 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-204ENST00000376643 CELA2BP08218 269 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-204ENST00000376643 CA4P22748 312 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 CD82P27701 267 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 VIPR1P32241 457 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 RGRP47804 291 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 PDX1P52945 283 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 CCL7P80098 99 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 ANO6Q4KMQ2 910 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 TMEM164Q5U3C3 297 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 MARC1Q5VT66 337 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 ZNF571Q7Z3V5 609 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-204ENST00000376643 ZSWIM9Q86XI8 627 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 JAMLQ86YT9 394 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 ZNF843Q8N446 348 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 NPWQ8N729 165 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 PDCD6IPQ8WUM4 868 aaKnown RBP14.78□□□□□ -0.04
HDAC6-204ENST00000376643 OR1E3Q8WZA6 343 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 MGME1Q9BQP7 344 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 CYP4F12Q9HCS2 524 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 FGF22Q9HCT0 170 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 TRNAU1APQ9NX07 287 aaKnown RBP14.78□□□□□ -0.04
HDAC6-204ENST00000376643 B4GALT6Q9UBX8 382 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 IP6K2Q9UHH9 426 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 LCMT1Q9UIC8 334 aa14.78□□□□□ -0.04
HDAC6-204ENST00000376643 BPTFQ12830 3046 aa14.77□□□□□ -0.04
HDAC6-204ENST00000376643 B4DGG1 531 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 NVLO15381 856 aaKnown RBP14.77□□□□□ -0.05
HDAC6-204ENST00000376643 TEX33O43247 280 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 SERPINC1P01008 464 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 CES1P23141 567 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 UGT1A5P35504 534 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 ZNF165P49910 485 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 CLN3Q13286 438 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 HADHQ16836 314 aaKnown RBP14.77□□□□□ -0.05
HDAC6-204ENST00000376643 ZSCAN23Q3MJ62 389 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms