RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 GOLGA2P5Q9HBQ8 144 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 ABCA6Q8N139 1617 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 PDE2AO00408 941 aaPredicted RBP13.74□□□□□ -0.21
COL4A1-201ENST00000375820 TPST2O60704 377 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 TIPRLO75663 272 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 MT-ND1P03886 318 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 PCCBP05166 539 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 ICAM3P32942 547 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 SLC26A3P40879 764 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 BRCC3P46736 316 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 SLC34A3Q8N130 599 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 TBC1D10AQ9BXI6 508 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 PIGUQ9H490 435 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 SNX15Q9NRS6 342 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 FOXO6A8MYZ6 492 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 SLC28A1O00337 649 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 ATP5F1P24539 256 aaPredicted RBP13.74□□□□□ -0.21
COL4A1-201ENST00000375820 TKTP29401 623 aaKnown RBP13.74□□□□□ -0.21
COL4A1-201ENST00000375820 TTPAP49638 278 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 LPCAT4Q643R3 524 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 MYDGFQ969H8 173 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 EPHB6O15197 1021 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 CCL16O15467 120 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 SLC35G4P0C7Q5 338 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 VEGFAP15692 232 aaPredicted RBP13.74□□□□□ -0.21
COL4A1-201ENST00000375820 ZNF143P52747 638 aaPredicted RBP13.74□□□□□ -0.21
COL4A1-201ENST00000375820 MRPS6P82932 125 aaKnown RBP13.74□□□□□ -0.21
COL4A1-201ENST00000375820 ZPBP2Q6X784 338 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 GET4Q7L5D6 327 aaPredicted RBP13.74□□□□□ -0.21
COL4A1-201ENST00000375820 TMEM86AQ8N2M4 240 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 ZNF433Q8N7K0 673 aaPredicted RBP13.74□□□□□ -0.21
COL4A1-201ENST00000375820 ZFP28Q8NHY6 868 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 KBTBD7Q8WVZ9 684 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 CEP295NLQ96MC4 621 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 IKZF4Q9H2S9 585 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 SGK2Q9HBY8 427 aa13.74□□□□□ -0.21
COL4A1-201ENST00000375820 C15orf38-AP3S2A0A0A6YYH1 394 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 G3V2T6 193 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 ITGA2BP08514 1039 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 FUT4P22083 530 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 NR4A1P22736 598 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 RABGGTBP53611 331 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 TAS2R40P59535 323 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 FOLH1Q04609 750 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 ST3GAL1Q11201 340 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 NET1Q7Z628 596 aaPredicted RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 ARPINQ7Z6K5 226 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 OR5B17Q8NGF7 314 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 CKAP2Q8WWK9 683 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 GPER1Q99527 375 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 TTLL2Q9BWV7 592 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 LMAN2LQ9H0V9 348 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 SUCOQ9UBS9 1254 aaKnown RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 AGO1Q9UL18 857 aaKnown RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 PPP2R3BQ9Y5P8 575 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 C1QTNF3-AMACRE9PGA6 284 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 DCLK1O15075 740 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 NDUFV1P49821 464 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 FAM131AQ6UXB0 335 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 ILDR1Q86SU0 546 aaPredicted RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 TMPRSS11BQ86T26 416 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 HTRA1Q92743 480 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 B3GNT5Q9BYG0 378 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 ABCG4Q9H172 646 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 DSN1Q9H410 356 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 SAR1AQ9NR31 198 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 MLYCDO95822 493 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 SEC13P55735 322 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 UBE2R2Q712K3 238 aaPredicted RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 RNF157Q96PX1 679 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 MBD2Q9UBB5 411 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 MANSC4A6NHS7 340 aaPredicted RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 CPSF4LA6NMK7 179 aaKnown RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 ELFN1P0C7U0 828 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 YAP1P46937 504 aaKnown RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 SMAD3P84022 425 aaKnown RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 AUHQ13825 339 aaKnown RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 NOMO2Q5JPE7 1267 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 ZNF248Q8NDW4 579 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 OR52J3Q8NH60 311 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 CRNNQ9UBG3 495 aaPredicted RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 CPS1P31327 1500 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 FTH1P02794 183 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 EFNA1P20827 205 aaPredicted RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 IL12AP29459 219 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 AKR1D1P51857 326 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 PEX6Q13608 980 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 PSMD5Q16401 504 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 FUKQ8N0W3 1084 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 OR4L1Q8NH43 312 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 PPCDCQ96CD2 204 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 VAT1Q99536 393 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 SLC17A7Q9P2U7 560 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 OAS3Q9Y6K5 1087 aaKnown RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 AK5Q9Y6K8 562 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 SLC6A2P23975 617 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 NAB1Q13506 487 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 KCNA10Q16322 511 aa13.73□□□□□ -0.21
COL4A1-201ENST00000375820 PSRC1Q6PGN9 363 aaPredicted RBP13.73□□□□□ -0.21
COL4A1-201ENST00000375820 RHBDF2Q6PJF5 856 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms