RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 DPPA4Q7L190 304 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 LYSMD3Q7Z3D4 306 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 OR14C36Q8NHC7 312 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 RLN3Q8WXF3 142 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 EID2BQ96D98 161 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 CYP8B1Q9UNU6 501 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 ZNF711Q9Y462 761 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 SDR42E2A6NKP2 422 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 PLRG1O43660 514 aaKnown RBP20.68■□□□□ 0.9
NELFE-202ENST00000375429 TNFRSF8P28908 595 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 HOXA6P31267 233 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 ACSL1P33121 698 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 ADPRHP54922 357 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 CBLBQ13191 982 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 BBS9Q3SYG4 887 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 TMEM52BQ4KMG9 183 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 CCDC38Q502W7 563 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 HP1BP3Q5SSJ5 553 aaPredicted RBP20.68■□□□□ 0.9
NELFE-202ENST00000375429 WDR93Q6P2C0 686 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 TTC30BQ8N4P2 665 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 FRMD1Q8N878 549 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 SRPK1Q96SB4 655 aaKnown RBP20.68■□□□□ 0.9
NELFE-202ENST00000375429 FOXP3Q9BZS1 431 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 IL22Q9GZX6 179 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 HACD3Q9P035 362 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 ARL5AQ9Y689 179 aa20.68■□□□□ 0.9
NELFE-202ENST00000375429 DOCK9Q9BZ29 2069 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 C1orf232A0A0U1RR37 186 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 E7ESA3 106 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 NEMP1O14524 444 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 AXIN1O15169 862 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 LDB2O43679 373 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 ZNF217O75362 1048 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 TDGF1P13385 188 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 ADRA1DP25100 572 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 PTSQ03393 145 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 PDIA2Q13087 525 aaKnown RBP20.67■□□□□ 0.9
NELFE-202ENST00000375429 ELF2Q15723 593 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 PCID2Q5JVF3 399 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 LRRC66Q68CR7 880 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 LIPIQ6XZB0 460 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 GLT6D1Q7Z4J2 308 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 TMC3Q7Z5M5 1100 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 GSPT2Q8IYD1 628 aaKnown RBP20.67■□□□□ 0.9
NELFE-202ENST00000375429 CBARPQ8N350 705 aaPredicted RBP20.67■□□□□ 0.9
NELFE-202ENST00000375429 EIF1ADQ8N9N8 165 aaKnown RBP20.67■□□□□ 0.9
NELFE-202ENST00000375429 MYRIPQ8NFW9 859 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 FMO2Q99518 471 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 WRAP53Q9BUR4 548 aaKnown RBP20.67■□□□□ 0.9
NELFE-202ENST00000375429 GPR63Q9BZJ6 419 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 BTBD1Q9H0C5 482 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 TRABDQ9H4I3 376 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 ZFYVE1Q9HBF4 777 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.67■□□□□ 0.9
NELFE-202ENST00000375429 MTRF1LQ9UGC7 380 aaKnown RBP20.67■□□□□ 0.9
NELFE-202ENST00000375429 KCTD3Q9Y597 815 aa20.67■□□□□ 0.9
NELFE-202ENST00000375429 TRPM6Q9BX84 2022 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 CTIFO43310 598 aaKnown RBP20.66■□□□□ 0.9
NELFE-202ENST00000375429 TSPAN6O43657 245 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 BUD23O43709 281 aaKnown RBP20.66■□□□□ 0.9
NELFE-202ENST00000375429 SEPT6Q14141 434 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 ARHGEF7Q14155 803 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 PTPRCAPQ14761 206 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 TAF1AQ15573 450 aaPredicted RBP20.66■□□□□ 0.9
NELFE-202ENST00000375429 CNGA3Q16281 694 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 MAP7D1Q3KQU3 841 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 DNAJC21Q5F1R6 531 aaKnown RBP20.66■□□□□ 0.9
NELFE-202ENST00000375429 CENPUQ71F23 418 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 CCDC25Q86WR0 208 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 IGDCC3Q8IVU1 814 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 RANBP9Q96S59 729 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 WDR83Q9BRX9 315 aaKnown RBP20.66■□□□□ 0.9
NELFE-202ENST00000375429 SGK2Q9HBY8 427 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 CHRAC1Q9NRG0 131 aa20.66■□□□□ 0.9
NELFE-202ENST00000375429 IGHV1OR15-9A0A0B4J2B8 117 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 FAM47DPA6NHR8 397 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 MMP20O60882 483 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 PCDH8O95206 1070 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 CRTAMO95727 393 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 SLC4A1P02730 911 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 FAM153BP0C7A2 387 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 LIG3P49916 1009 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 CSTF1Q05048 431 aaKnown RBP20.65■□□□□ 0.9
NELFE-202ENST00000375429 FASTKD3Q14CZ7 662 aaKnown RBP20.65■□□□□ 0.9
NELFE-202ENST00000375429 FAM153CQ494X1 144 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 FAM160A2Q8N612 972 aaPredicted RBP20.65■□□□□ 0.9
NELFE-202ENST00000375429 ZNF778Q96MU6 729 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 TRIM56Q9BRZ2 755 aaKnown RBP20.65■□□□□ 0.9
NELFE-202ENST00000375429 SAYSD1Q9NPB0 183 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 WSB2Q9NYS7 404 aaPredicted RBP20.65■□□□□ 0.9
NELFE-202ENST00000375429 RAB21Q9UL25 225 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 INVSQ9Y283 1065 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 TCAF1Q9Y4C2 921 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 MAD1L1Q9Y6D9 718 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 TEX264Q9Y6I9 313 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 KMT2EQ8IZD2 1858 aa20.65■□□□□ 0.9
NELFE-202ENST00000375429 TBC1D3DA0A087WVF3 549 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 TBC1D3IA0A087WXS9 549 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 TBC1D3EA0A087X179 549 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 TBC1D3KA0A087X1G2 549 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms