RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 MND1Q9BWT6 205 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 HES7Q9BYE0 225 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 TAS2R1Q9NYW7 299 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 GPRC5DQ9NZD1 345 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 PCDHA4Q9UN74 947 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 SORCS3Q9UPU3 1222 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 POFUT2Q9Y2G5 429 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 ACTL7AQ9Y615 435 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 H3BSH0 61 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 PRKD3O94806 890 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 PDYNP01213 254 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF823P16415 610 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 ARPC4P59998 168 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 KCNJ2P63252 427 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 PLA2G7Q13093 441 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 MSLNQ13421 630 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-202ENST00000375405 DUOXA2Q1HG44 320 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 EXOSC6Q5RKV6 272 aaKnown RBP4.65□□□□□ -1.66
SCN1A-202ENST00000375405 LPCAT3Q6P1A2 487 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 TAF2Q6P1X5 1199 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 BNC2Q6ZN30 1099 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-202ENST00000375405 OR8K5Q8NH50 307 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 BAP1Q92560 729 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 FOXRED1Q96CU9 486 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-202ENST00000375405 TPPP3Q9BW30 176 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 PAPOLGQ9BWT3 736 aaKnown RBP4.65□□□□□ -1.66
SCN1A-202ENST00000375405 SLC6A16Q9GZN6 736 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 VNN3Q9NY84 501 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 NENFQ9UMX5 172 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 COG5Q9UP83 839 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 R3HDM2Q9Y2K5 976 aaKnown RBP4.65□□□□□ -1.66
SCN1A-202ENST00000375405 NR2E1Q9Y466 385 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 KCNK5O95279 499 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 ANGPTL1O95841 491 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 PNMA6AP0CW24 399 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-202ENST00000375405 PVALBP20472 110 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-202ENST00000375405 GRM5P41594 1212 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 SEC13P55735 322 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 FMO1Q01740 532 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 KPNB1Q14974 876 aaKnown RBP4.65□□□□□ -1.66
SCN1A-202ENST00000375405 PCID2Q5JVF3 399 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 AGAP9Q5VTM2 703 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 CADM2Q8N3J6 435 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 FCRL4Q96PJ5 515 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 FAM111AQ96PZ2 611 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 METTL22Q9BUU2 404 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-202ENST00000375405 HIPK3Q9H422 1215 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 DPEP2Q9H4A9 486 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 KLC4Q9NSK0 619 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 ABCB8Q9NUT2 735 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 PLEK2Q9NYT0 353 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 PCDHGA8Q9Y5G5 932 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 SEC16AO15027 2179 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 PLCH2O75038 1416 aa4.65□□□□□ -1.66
SCN1A-202ENST00000375405 RALGAPBQ86X10 1494 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 AGAP5A6NIR3 686 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 FPGTO14772 594 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 SLC16A4O15374 487 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 SLC31A2O15432 143 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PDE5AO76074 875 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 LCKP06239 509 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PCSK1P29120 753 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 ALDH3B1P43353 468 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 LUMP51884 338 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 MAGOHP61326 146 aaKnown RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 FGL1Q08830 312 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 AIMP2Q13155 320 aaKnown RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 SF1Q15637 639 aaKnown RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 LONRF1Q17RB8 773 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PLCXD3Q63HM9 321 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 XRRA1Q6P2D8 792 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 STOX1Q6ZVD7 989 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PARP8Q8N3A8 854 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 CCDC33Q8N5R6 958 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 CD300LFQ8TDQ1 290 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PARK7Q99497 189 aaKnown RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 FAM117AQ9C073 453 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 SEC61A2Q9H9S3 476 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 LRIT1Q9P2V4 623 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 FBXW2Q9UKT8 454 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 ASF1AQ9Y294 204 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PEX16Q9Y5Y5 336 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 DOCK7Q96N67 2140 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 H3BMQ9 156 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 STMND1H3BQB6 276 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 HAX1O00165 279 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 TNFRSF10BO14763 440 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 ZBTB14O43829 449 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 KAT7O95251 611 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 RAB36O95755 333 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 IFNA10P01566 189 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 IFNA4P05014 189 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PGRP06401 933 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 ATP5BP06576 529 aaKnown RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 CHN1P15882 459 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 UQCRFS1P47985 274 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 GCLMP48507 274 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 DEFA5Q01523 94 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 DGCR6Q14129 220 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 BCL2A1Q16548 175 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms