RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ESAMQ96AP7 390 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 DACH2Q96NX9 599 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 TEX12Q9BXU0 123 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 TMEM216Q9P0N5 145 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 CEP290O15078 2479 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 IQCF5A8MTL0 148 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 UNC5CO95185 931 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 ADH1CP00326 375 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 PTPN2P17706 415 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 ME2P23368 584 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 TAS2R39P59534 338 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 CENPLQ8N0S6 344 aaPredicted RBP18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 RBFAQ8N0V3 343 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 ZNF358Q9NW07 568 aa18.01■□□□□ 0.47
PTPDC1-202ENST00000375360 STRCP1A6NGW2 1772 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 SAC3D1A6NKF1 404 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 GRM6O15303 877 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 ULK1O75385 1050 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 PRKCGP05129 697 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 LINC00032P0C843 101 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 OASLQ15646 514 aaKnown RBP18■□□□□ 0.47
PTPDC1-202ENST00000375360 FLCNQ8NFG4 579 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 PYDC1Q8WXC3 89 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 SLC25A23Q9BV35 468 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 ABCB8Q9NUT2 735 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 TBC1D14Q9P2M4 693 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 MYH8P13535 1937 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 CLUHO75153 1309 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 CDK14O94921 469 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 EPHX1P07099 455 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 MSX2P35548 267 aaPredicted RBP18■□□□□ 0.47
PTPDC1-202ENST00000375360 FRG1Q14331 258 aaKnown RBP18■□□□□ 0.47
PTPDC1-202ENST00000375360 UPP1Q16831 310 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 IYDQ6PHW0 289 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 ISLR2Q6UXK2 745 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 ZNF513Q8N8E2 541 aaPredicted RBP18■□□□□ 0.47
PTPDC1-202ENST00000375360 HBEGFQ99075 208 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 KCTD14Q9BQ13 255 aaPredicted RBP18■□□□□ 0.47
PTPDC1-202ENST00000375360 SAR1AQ9NR31 198 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18■□□□□ 0.47
PTPDC1-202ENST00000375360 HS3ST4Q9Y661 456 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 SNAP91O60641 907 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 CSF2RAP15509 400 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 NDST2P52849 883 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 VWA5B1Q5TIE3 1220 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 IZUMO2Q6UXV1 221 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 ZBTB49Q6ZSB9 765 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 ZNF572Q7Z3I7 529 aaPredicted RBP18■□□□□ 0.47
PTPDC1-202ENST00000375360 COPG2Q9UBF2 871 aa18■□□□□ 0.47
PTPDC1-202ENST00000375360 PTGESO14684 152 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 PER2O15055 1255 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 CDH2P19022 906 aaPredicted RBP17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 CES1P23141 567 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 IL10RBQ08334 325 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 GPR17Q13304 367 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 MSS51Q4VC12 460 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 TBCELQ5QJ74 424 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 CST9Q5W186 159 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 RNF19BQ6ZMZ0 732 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 TMCO2Q7Z6W1 182 aaPredicted RBP17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 ADAMTSL2Q86TH1 951 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 RGL4Q8IZJ4 473 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 DNAJB14Q8TBM8 379 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 SH3RF2Q8TEC5 729 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 FKBPLQ9UIM3 349 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 PRR5-ARHGAP8B1AHC4 643 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 ENTPD5O75356 428 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 CNTN5O94779 1100 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 HLA-DQB2P05538 268 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 GALTP07902 379 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 LIMK2P53671 638 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 MRPS22P82650 360 aaKnown RBP17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 ARHGAP8P85298 464 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 SNX30Q5VWJ9 437 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 CAMK1DQ8IU85 385 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 FAM9CQ8IZT9 166 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 ZNF366Q8N895 744 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 CCDC3Q9BQI4 270 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 ZNF510Q9Y2H8 683 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 KANSL1LA0AUZ9 987 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 MTMR11A4FU01 709 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 CRHR1P34998 444 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 MAPKAPK2P49137 400 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 CNTN1Q12860 1018 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 ATAT1Q5SQI0 421 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 ADGRF1Q5T601 910 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 NSMCE2Q96MF7 247 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 WRAP53Q9BUR4 548 aaKnown RBP17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 STN1Q9H668 368 aaKnown RBP17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 IGSF9Q9P2J2 1179 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 SLC12A4Q9UP95 1085 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 NAV1Q8NEY1 1877 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 GLYATL1P3A0A0U1RQE8 302 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 RGS14O43566 566 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 PRAMEF1O95521 474 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 S100A3P33764 101 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 ZNF132P52740 706 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 VAC14Q08AM6 782 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 TRAF2Q12933 501 aa17.99■□□□□ 0.47
PTPDC1-202ENST00000375360 PREPLQ4J6C6 727 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms