RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 DEC1Q9P2X7 70 aa17.4■□□□□ 0.38
UBE3D-203ENST00000369747 MTO1Q9Y2Z2 717 aaKnown RBP17.4■□□□□ 0.38
UBE3D-203ENST00000369747 F5P12259 2224 aa17.39■□□□□ 0.38
UBE3D-203ENST00000369747 A0A0G2JND7 137 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 CFAP73A6NFT4 308 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 K7ERQ8 282 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 SNNO75324 88 aaPredicted RBP17.39■□□□□ 0.37
UBE3D-203ENST00000369747 GMPRP36959 345 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 SKIV2L2P42285 1042 aaKnown RBP17.39■□□□□ 0.37
UBE3D-203ENST00000369747 ABCG1P45844 678 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 SERPINB8P50452 374 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 RENBPP51606 427 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 KDSRQ06136 332 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 LBRQ14739 615 aaKnown RBP17.39■□□□□ 0.37
UBE3D-203ENST00000369747 DBN1Q16643 649 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 KDELC1Q6UW63 502 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 ASRGL1Q7L266 308 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 KIAA0907Q7Z7F0 614 aaPredicted RBP17.39■□□□□ 0.37
UBE3D-203ENST00000369747 ZNF557Q8N988 423 aaPredicted RBP17.39■□□□□ 0.37
UBE3D-203ENST00000369747 SORCS1Q8WY21 1168 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 FSD1LQ9BXM9 530 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 NT5MQ9NPB1 228 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 UBA2Q9UBT2 640 aaPredicted RBP17.39■□□□□ 0.37
UBE3D-203ENST00000369747 MUSKO15146 869 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 NARSO43776 548 aaKnown RBP17.39■□□□□ 0.37
UBE3D-203ENST00000369747 UNC5CO95185 931 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 PROCP04070 461 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 STK19P49842 368 aaPredicted RBP17.39■□□□□ 0.37
UBE3D-203ENST00000369747 MAXP61244 160 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 PUS10Q3MIT2 529 aaKnown RBP17.39■□□□□ 0.37
UBE3D-203ENST00000369747 TMCO4Q5TGY1 634 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 PGBD5Q8N414 524 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 TEX26Q8N6G2 289 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.39■□□□□ 0.37
UBE3D-203ENST00000369747 ACDQ96AP0 544 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 IMP4Q96G21 291 aaKnown RBP17.39■□□□□ 0.37
UBE3D-203ENST00000369747 C20orf27Q9GZN8 174 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 ZNF395Q9H8N7 513 aaPredicted RBP17.39■□□□□ 0.37
UBE3D-203ENST00000369747 TMEM216Q9P0N5 145 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 TRIM33Q9UPN9 1127 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 FAM50BQ9Y247 325 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 SLC27A6Q9Y2P4 619 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 TCAF1Q9Y4C2 921 aa17.39■□□□□ 0.37
UBE3D-203ENST00000369747 KIAA1549LQ6ZVL6 1849 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 TTC24A2A3L6 582 aaPredicted RBP17.38■□□□□ 0.37
UBE3D-203ENST00000369747 LOC730098B7Z3J9 87 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 PRRT4C9JH25 899 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 SMAD6O43541 496 aaKnown RBP17.38■□□□□ 0.37
UBE3D-203ENST00000369747 GJB3O75712 270 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 HNRNPH1P31943 449 aaKnown RBP17.38■□□□□ 0.37
UBE3D-203ENST00000369747 ARFIP2P53365 341 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 WNT3AP56704 352 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 KCNJ2P63252 427 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 PCLAFQ15004 111 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 FASTKD1Q53R41 847 aaKnown RBP17.38■□□□□ 0.37
UBE3D-203ENST00000369747 IER5LQ5T953 404 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 MBLAC2Q68D91 279 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 CYB5D1Q6P9G0 228 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 ZCCHC23Q6ZST2 131 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 KDELC2Q7Z4H8 507 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 TBC1D1Q86TI0 1168 aaPredicted RBP17.38■□□□□ 0.37
UBE3D-203ENST00000369747 MTDHQ86UE4 582 aaKnown RBP17.38■□□□□ 0.37
UBE3D-203ENST00000369747 AHI1Q8N157 1196 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 PHTF2Q8N3S3 785 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 ACVR1CQ8NER5 493 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 PPHLN1Q8NEY8 458 aaKnown RBP17.38■□□□□ 0.37
UBE3D-203ENST00000369747 CSGALNACT1Q8TDX6 532 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 NSMCE1Q8WV22 266 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 NXPE3Q969Y0 559 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 VPS39Q96JC1 886 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 ZNF599Q96NL3 588 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 TMEM120AQ9BXJ8 343 aa17.38■□□□□ 0.37
UBE3D-203ENST00000369747 MRM3Q9HC36 420 aaKnown RBP17.38■□□□□ 0.37
UBE3D-203ENST00000369747 FBRSL1Q9HCM7 1045 aaKnown RBP17.38■□□□□ 0.37
UBE3D-203ENST00000369747 TIMM44O43615 452 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 MMP2P08253 660 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 NQO1P15559 274 aaKnown RBP17.37■□□□□ 0.37
UBE3D-203ENST00000369747 ARNTP27540 789 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 CHRNA4P43681 627 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 ARCN1P48444 511 aaKnown RBP17.37■□□□□ 0.37
UBE3D-203ENST00000369747 ELF3P78545 371 aaPredicted RBP17.37■□□□□ 0.37
UBE3D-203ENST00000369747 IHHQ14623 411 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 SPDYAQ5MJ70 313 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 RETSATQ6NUM9 610 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 ESRP1Q6NXG1 681 aaKnown RBP17.37■□□□□ 0.37
UBE3D-203ENST00000369747 PLD6Q8N2A8 252 aaKnown RBP17.37■□□□□ 0.37
UBE3D-203ENST00000369747 PTCD2Q8WV60 388 aaKnown RBP17.37■□□□□ 0.37
UBE3D-203ENST00000369747 KLHL29Q96CT2 875 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 EXOC2Q96KP1 924 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 CIPCQ9C0C6 399 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 CAB39LQ9H9S4 337 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 ARHGEF3Q9NR81 526 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 KLC4Q9NSK0 619 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 ZNF358Q9NW07 568 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 NSMCE4AQ9NXX6 385 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 ZFP69BQ9UJL9 534 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 FCF1Q9Y324 198 aaKnown RBP17.37■□□□□ 0.37
UBE3D-203ENST00000369747 ANTXRLA6NF34 631 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 TMCC1O94876 653 aa17.37■□□□□ 0.37
UBE3D-203ENST00000369747 T-ENOLP0DO92 83 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms