RNA–Protein interactions for RNA: ENST00000369452.8

SHOC2-202, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOC2, Length 3,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-202ENST00000369452 UBXN10Q96LJ8 280 aa13.1□□□□□ -0.31
SHOC2-202ENST00000369452 CINPQ9BW66 212 aaPredicted RBP13.1□□□□□ -0.31
SHOC2-202ENST00000369452 FNDC3AQ9Y2H6 1198 aaKnown RBP13.1□□□□□ -0.31
SHOC2-202ENST00000369452 TCF20Q9UGU0 1960 aaKnown RBP13.1□□□□□ -0.31
SHOC2-202ENST00000369452 LRRK1Q38SD2 2015 aa13.1□□□□□ -0.31
SHOC2-202ENST00000369452 TRAFD1O14545 582 aaPredicted RBP13.1□□□□□ -0.31
SHOC2-202ENST00000369452 UBFD1O14562 309 aaKnown RBP13.1□□□□□ -0.31
SHOC2-202ENST00000369452 PSMD3O43242 534 aa13.1□□□□□ -0.31
SHOC2-202ENST00000369452 CKMP06732 381 aa13.1□□□□□ -0.31
SHOC2-202ENST00000369452 HNRNPH1P31943 449 aaKnown RBP13.1□□□□□ -0.31
SHOC2-202ENST00000369452 TAF12Q16514 161 aa13.1□□□□□ -0.31
SHOC2-202ENST00000369452 LRRC73Q5JTD7 316 aa13.1□□□□□ -0.31
SHOC2-202ENST00000369452 USP13Q92995 863 aaPredicted RBP13.1□□□□□ -0.31
SHOC2-202ENST00000369452 CDKN2AIPNLQ96HQ2 116 aa13.1□□□□□ -0.31
SHOC2-202ENST00000369452 TRIM55Q9BYV6 548 aa13.1□□□□□ -0.31
SHOC2-202ENST00000369452 MFSD1Q9H3U5 465 aa13.1□□□□□ -0.31
SHOC2-202ENST00000369452 CERS4Q9HA82 394 aa13.1□□□□□ -0.31
SHOC2-202ENST00000369452 FCHO1O14526 889 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 ELF1P32519 619 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 IDH3AP50213 366 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 CSHL1Q14406 222 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 CDKN3Q16667 212 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 INSCQ1MX18 579 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 HECTD2Q5U5R9 776 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 CYHR1Q6ZMK1 362 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 GIMAP7Q8NHV1 300 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 PDCD6IPQ8WUM4 868 aaKnown RBP13.09□□□□□ -0.31
SHOC2-202ENST00000369452 BIRC8Q96P09 236 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 OR52B2Q96RD2 323 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 CCDC106Q9BWC9 280 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 PCDHB12Q9Y5F1 795 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 IQCF5A8MTL0 148 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 TIMM44O43615 452 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 NEBLO76041 1014 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 TSPAN8P19075 237 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 FUT11Q495W5 492 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 C7orf61Q8IZ16 206 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 CDK5RAP1Q96SZ6 601 aaKnown RBP13.09□□□□□ -0.31
SHOC2-202ENST00000369452 RASSF4Q9H2L5 321 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 THAP1Q9NVV9 213 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 OTOL1A6NHN0 477 aaPredicted RBP13.09□□□□□ -0.31
SHOC2-202ENST00000369452 ZBTB14O43829 449 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 NEFHP12036 1026 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 NQO1P15559 274 aaKnown RBP13.09□□□□□ -0.31
SHOC2-202ENST00000369452 ABCE1P61221 599 aaKnown RBP13.09□□□□□ -0.31
SHOC2-202ENST00000369452 NAIF1Q69YI7 327 aaPredicted RBP13.09□□□□□ -0.31
SHOC2-202ENST00000369452 HTR3DQ70Z44 454 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 RBM23Q86U06 439 aaKnown RBP13.09□□□□□ -0.31
SHOC2-202ENST00000369452 PHTF2Q8N3S3 785 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 BRSK1Q8TDC3 778 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 PTCD2Q8WV60 388 aaKnown RBP13.09□□□□□ -0.31
SHOC2-202ENST00000369452 SORCS1Q8WY21 1168 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 ING5Q8WYH8 240 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 TMA16Q96EY4 203 aaKnown RBP13.09□□□□□ -0.31
SHOC2-202ENST00000369452 ZNF599Q96NL3 588 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 LBHD1Q9BQE6 289 aaPredicted RBP13.09□□□□□ -0.31
SHOC2-202ENST00000369452 MTG2Q9H4K7 406 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 FKBPLQ9UIM3 349 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 ZFP69BQ9UJL9 534 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 VPS28Q9UK41 221 aa13.09□□□□□ -0.31
SHOC2-202ENST00000369452 PRR5-ARHGAP8B1AHC4 643 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 MPOP05164 745 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 GSTA1P08263 222 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 SERPINF2P08697 491 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 PBX2P40425 430 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 GRIA4P48058 902 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 CD151P48509 253 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 SLC7A9P82251 487 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 ARHGAP8P85298 464 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 VEPH1Q14D04 833 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 TTC30BQ8N4P2 665 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 SCUBE2Q9NQ36 999 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 ASB1Q9Y576 335 aa13.08□□□□□ -0.31
SHOC2-202ENST00000369452 ANKRD66B4E2M5 251 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 GRID2O43424 1007 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 PAPSS2O95340 614 aaPredicted RBP13.08□□□□□ -0.32
SHOC2-202ENST00000369452 NDST3O95803 873 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 NAGLUP54802 743 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 OR4D1Q15615 310 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 SLC14A2Q15849 920 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 WDR75Q8IWA0 830 aaKnown RBP13.08□□□□□ -0.32
SHOC2-202ENST00000369452 C12orf76Q8N812 135 aaPredicted RBP13.08□□□□□ -0.32
SHOC2-202ENST00000369452 VN1R2Q8NFZ6 395 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 PIH1D2Q8WWB5 315 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 IFT43Q96FT9 208 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 NUDCD1Q96RS6 583 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 WDR55Q9H6Y2 383 aaPredicted RBP13.08□□□□□ -0.32
SHOC2-202ENST00000369452 CYP4F12Q9HCS2 524 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 SEPT3Q9UH03 358 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 FRYLO94915 3013 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 WDFY4Q6ZS81 3184 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 CD3EAPO15446 510 aaKnown RBP13.08□□□□□ -0.32
SHOC2-202ENST00000369452 MGRN1O60291 552 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 BMPR1AP36894 532 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 ALDH18A1P54886 795 aaKnown RBP13.08□□□□□ -0.32
SHOC2-202ENST00000369452 XIAPP98170 497 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 FPGSQ05932 587 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 ARL13AQ5H913 290 aaPredicted RBP13.08□□□□□ -0.32
SHOC2-202ENST00000369452 TECRLQ5HYJ1 363 aa13.08□□□□□ -0.32
SHOC2-202ENST00000369452 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms