RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 ACAD10Q6JQN1 1059 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 BRAT1Q6PJG6 821 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 TAF8Q7Z7C8 310 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 SRLQ86TD4 932 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 MCOLN2Q8IZK6 566 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 Q8N9G6 341 aaPredicted RBP10.4□□□□□ -0.74
CLRN3-201ENST00000368671 TSEN2Q8NCE0 465 aaKnown RBP10.4□□□□□ -0.74
CLRN3-201ENST00000368671 SNRNP27Q8WVK2 155 aaKnown RBP10.4□□□□□ -0.74
CLRN3-201ENST00000368671 OR1E3Q8WZA6 343 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 TMEM74Q96NL1 305 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 TUBGCP5Q96RT8 1024 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 RBM15Q96T37 977 aaKnown RBP eCLIP10.4□□□□□ -0.74
CLRN3-201ENST00000368671 CINPQ9BW66 212 aaPredicted RBP10.4□□□□□ -0.74
CLRN3-201ENST00000368671 STRADBQ9C0K7 418 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 LRRN3Q9H3W5 708 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 ATP13A3Q9H7F0 1226 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 SP110Q9HB58 689 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 MRPL40Q9NQ50 206 aaKnown RBP10.4□□□□□ -0.74
CLRN3-201ENST00000368671 PISDQ9UG56 409 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 LIMA1Q9UHB6 759 aaKnown RBP10.4□□□□□ -0.74
CLRN3-201ENST00000368671 PCSK1NQ9UHG2 260 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 ATXN7L1Q9ULK2 861 aaPredicted RBP10.4□□□□□ -0.74
CLRN3-201ENST00000368671 KIF26BQ2KJY2 2108 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 TMEM202A6NGA9 273 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 B4DGG1 531 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 TMX2-CTNND1H3BSU7 103 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 PYCARD-AS1I3L0S3 204 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 RECQL5O94762 991 aaPredicted RBP10.39□□□□□ -0.75
CLRN3-201ENST00000368671 ELFN1P0C7U0 828 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 JMJD7P0C870 316 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 FERP16591 822 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 CDK11BP21127 795 aaKnown RBP10.39□□□□□ -0.75
CLRN3-201ENST00000368671 TNFAIP3P21580 790 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 HTR7P34969 479 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 KIAA1024LP59773 190 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 BCL2L1Q07817 233 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 EIF3IQ13347 325 aaKnown RBP10.39□□□□□ -0.75
CLRN3-201ENST00000368671 AGERQ15109 404 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 TGIF1Q15583 401 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 SASS6Q6UVJ0 657 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 ARHGAP36Q6ZRI8 547 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 CCNJLQ8IV13 435 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 SFTPA2Q8IWL1 248 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 FAM46DQ8NEK8 389 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 GPR156Q8NFN8 814 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 OR6C4Q8NGE1 309 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 OR56A4Q8NGH8 313 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 FUBP1Q96AE4 644 aaKnown RBP10.39□□□□□ -0.75
CLRN3-201ENST00000368671 CCNL2Q96S94 520 aaPredicted RBP10.39□□□□□ -0.75
CLRN3-201ENST00000368671 PEBP4Q96S96 227 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 KCTD15Q96SI1 283 aaPredicted RBP10.39□□□□□ -0.75
CLRN3-201ENST00000368671 SNRNP25Q9BV90 132 aaKnown RBP10.39□□□□□ -0.75
CLRN3-201ENST00000368671 SUDS3Q9H7L9 328 aaPredicted RBP10.39□□□□□ -0.75
CLRN3-201ENST00000368671 FGF22Q9HCT0 170 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 DONSONQ9NYP3 566 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 TAS2R14Q9NYV8 317 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 LOXL2Q9Y4K0 774 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 IGSF10Q6WRI0 2623 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 KNTC1P50748 2209 aa10.39□□□□□ -0.75
CLRN3-201ENST00000368671 RP1P56715 2156 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 SCN8AQ9UQD0 1980 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 B8ZZF3 427 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 TEX33O43247 280 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 CCDC172P0C7W6 258 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 GLB1P16278 677 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 ERCC2P18074 760 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 ITIH1P19827 911 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 KELP23276 732 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 CCKBRP32239 447 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 CSNK1DP48730 415 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 SCNN1BP51168 640 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 MYL5Q02045 173 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 SRSF6Q13247 344 aaKnown RBP10.38□□□□□ -0.75
CLRN3-201ENST00000368671 ACOX1Q15067 660 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 C14orf28Q4W4Y0 310 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 PPP6R3Q5H9R7 873 aaPredicted RBP10.38□□□□□ -0.75
CLRN3-201ENST00000368671 ERMARDQ5T6L9 678 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 LIPIQ6XZB0 460 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 RFX8Q6ZV50 586 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 DPPA4Q7L190 304 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 ARHGAP12Q8IWW6 846 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 NPWQ8N729 165 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 CCL4L1Q8NHW4 92 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 ECHDC3Q96DC8 303 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 MED8Q96G25 268 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 ERGIC2Q96RQ1 377 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 LGR4Q9BXB1 951 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 TMEM168Q9H0V1 697 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 DPEP2Q9H4A9 486 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 CYP4F12Q9HCS2 524 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 LRIT1Q9P2V4 623 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 PCDHGA7Q9Y5G6 932 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 DGKBQ9Y6T7 804 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 RNF215Q9Y6U7 377 aa10.38□□□□□ -0.75
CLRN3-201ENST00000368671 ASXL3Q9C0F0 2248 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 TTC24A2A3L6 582 aaPredicted RBP10.37□□□□□ -0.75
CLRN3-201ENST00000368671 CFAP69A5D8W1 941 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 EFSO43281 561 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 NOBOXO60393 691 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms