RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 PSAT1Q9Y617 370 aa9.54□□□□□ -0.88
VTA1-201ENST00000367621 COL4A3Q01955 1670 aa9.54□□□□□ -0.88
VTA1-201ENST00000367621 XIRP2A4UGR9 3374 aa9.54□□□□□ -0.88
VTA1-201ENST00000367621 A0A0U1RQS6 177 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 A0A1W2PPM1 405 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 CCDC78A2IDD5 438 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 HEATR9A2RTY3 570 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 GOLGA6L10A6NI86 522 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 GOLGA8TH3BQL2 631 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 POLR3GO15318 223 aaPredicted RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 TIMM44O43615 452 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 SOCS5O75159 536 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 POP4O95707 220 aaKnown RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 CTSLP07711 333 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 F7P08709 466 aaPredicted RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 KCNA5P22460 613 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 SP100P23497 879 aaPredicted RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 GABRB3P28472 473 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 EIF2DP41214 584 aaKnown RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 MSH2P43246 934 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 SOX9P48436 509 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 CCNHP51946 323 aaPredicted RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 ZNF140P52738 457 aaPredicted RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 RPL26P61254 145 aaKnown RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 SNRPD1P62314 119 aaKnown RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 BCL2L1Q07817 233 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 NR1H3Q13133 447 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 SMAD4Q13485 552 aaKnown RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 NAB1Q13506 487 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 SEPT6Q14141 434 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 MPP2Q14168 576 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 TMED2Q15363 201 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 SMAD1Q15797 465 aaKnown RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 CCDC85BQ15834 202 aaPredicted RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 AAK1Q2M2I8 961 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 ITPRIPL2Q3MIP1 535 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 HSP90AA5PQ58FG0 334 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 ARMC12Q5T9G4 340 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 KIAA0930Q6ICG6 404 aaPredicted RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 TRABD2AQ86V40 505 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 CNTN4Q8IWV2 1026 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 GOLGA6L1Q8N7Z2 621 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 TERB1Q8NA31 727 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 KDM1BQ8NB78 822 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 EZH1Q92800 747 aaPredicted RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 PTPRN2Q92932 1015 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 GLMNQ92990 594 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 TUBGCP5Q96RT8 1024 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 CIPCQ9C0C6 399 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 SUV39H2Q9H5I1 410 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 C20orf96Q9NUD7 363 aaPredicted RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 RPL26L1Q9UNX3 145 aaKnown RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 PPIL1Q9Y3C6 166 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 PCDHB9Q9Y5E1 797 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 ARL5AQ9Y689 179 aa9.53□□□□□ -0.88
VTA1-201ENST00000367621 KIF26AQ9ULI4 1882 aaPredicted RBP9.53□□□□□ -0.88
VTA1-201ENST00000367621 TSPAN11A1L157 253 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 SHISA7A6NL88 538 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 POM121CA8CG34 1229 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 CCL22O00626 93 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 BUD23O43709 281 aaKnown RBP9.52□□□□□ -0.89
VTA1-201ENST00000367621 KAT7O95251 611 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 VAPBO95292 243 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 ATP5BP06576 529 aaKnown RBP9.52□□□□□ -0.89
VTA1-201ENST00000367621 CCNYL3P0C7X3 344 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 GRIA2P42262 883 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 GALK1P51570 392 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 EIF4HQ15056 248 aaKnown RBP9.52□□□□□ -0.89
VTA1-201ENST00000367621 TAF1AQ15573 450 aaPredicted RBP9.52□□□□□ -0.89
VTA1-201ENST00000367621 ACCSLQ4AC99 568 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 C9orf64Q5T6V5 341 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 PDPK2PQ6A1A2 396 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 PACS1Q6VY07 963 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 TIFABQ6ZNK6 161 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 NLRP9Q7RTR0 991 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 KCNMB4Q86W47 210 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 RASSF3Q86WH2 238 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 CTAGE3PQ8IX95 158 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 OR13C4Q8NGS5 318 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 BLOC1S5Q8TDH9 187 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 PEX13Q92968 403 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 RMDN1Q96DB5 314 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 SERAC1Q96JX3 654 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 DNAJC1Q96KC8 554 aaKnown RBP9.52□□□□□ -0.89
VTA1-201ENST00000367621 ZNF641Q96N77 438 aaPredicted RBP9.52□□□□□ -0.89
VTA1-201ENST00000367621 ADGRE3Q9BY15 652 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 TMEM245Q9H330 911 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 ATP13A3Q9H7F0 1226 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 MAGEE1Q9HCI5 957 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 IARS2Q9NSE4 1012 aaKnown RBP9.52□□□□□ -0.89
VTA1-201ENST00000367621 NLE1Q9NVX2 485 aaPredicted RBP9.52□□□□□ -0.89
VTA1-201ENST00000367621 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.52□□□□□ -0.893e-6■■■■□ 22.2
VTA1-201ENST00000367621 THAP10Q9P2Z0 257 aaPredicted RBP9.52□□□□□ -0.89
VTA1-201ENST00000367621 ACTL7BQ9Y614 415 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 DOCK8Q8NF50 2099 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 SHROOM3Q8TF72 1996 aa9.52□□□□□ -0.89
VTA1-201ENST00000367621 MYO9BQ13459 2157 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 MYO18AQ92614 2054 aaKnown RBP9.51□□□□□ -0.89
VTA1-201ENST00000367621 A0A0J9YYE9 177 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 OR51F1A6NGY5 319 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms