RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 MIIPQ5JXC2 388 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 CYP4A22Q5TCH4 519 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 NAIF1Q69YI7 327 aaPredicted RBP8.15□□□□□ -1.1
YBX3-204ENST00000366290 PARM1Q6UWI2 310 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 ZNF783Q6ZMS7 281 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 HTR3DQ70Z44 454 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 SRLQ86TD4 932 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 ITIH5Q86UX2 942 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 LUZP1Q86V48 1076 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 GAS2L3Q86XJ1 694 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 DCP1BQ8IZD4 617 aaKnown RBP8.15□□□□□ -1.1
YBX3-204ENST00000366290 ADGRF2Q8IZF7 708 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 TTC9BQ8N6N2 239 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 OR6B3Q8NGW1 331 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 TAS1R2Q8TE23 839 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 SEMA4DQ92854 862 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 ELSPBP1Q96BH3 223 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 TCEAL4Q96EI5 215 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 CEP295NLQ96MC4 621 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 KLHL32Q96NJ5 620 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 RPP25Q9BUL9 199 aaKnown RBP8.15□□□□□ -1.1
YBX3-204ENST00000366290 BDH2Q9BUT1 245 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 GPR87Q9BY21 358 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 KRTAP9-3Q9BYQ3 159 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 DPH1Q9BZG8 443 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 GPR88Q9GZN0 384 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 TSPY26PQ9H489 355 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 TMEM8AQ9HCN3 771 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 ASAH2Q9NR71 780 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 DDX43Q9NXZ2 648 aaKnown RBP8.15□□□□□ -1.1
YBX3-204ENST00000366290 COQ4Q9Y3A0 265 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 SNX9Q9Y5X1 595 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 CACNA1IQ9P0X4 2223 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 ZNF638Q14966 1978 aaKnown RBP8.15□□□□□ -1.11
YBX3-204ENST00000366290 ANAPC1Q9H1A4 1944 aa8.15□□□□□ -1.11
YBX3-204ENST00000366290 DMXL1Q9Y485 3027 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 GOLGA6L6A8MZA4 724 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 KCNJ18B7U540 433 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 LEFTY2O00292 366 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 KPNA5O15131 536 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 PI15O43692 258 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 NARSO43776 548 aaKnown RBP8.14□□□□□ -1.11
YBX3-204ENST00000366290 HLA-DRAP01903 254 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 GTF2H1P32780 548 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 NBL1P41271 181 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 MAGEA11P43364 429 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 FMO5P49326 533 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 MXI1P50539 228 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 CLCN5P51795 746 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 MYL6P60660 151 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 MYL7Q01449 175 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 KCNJ12Q14500 433 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 KRT31Q15323 416 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 MAPRE1Q15691 268 aaKnown RBP8.14□□□□□ -1.11
YBX3-204ENST00000366290 TPD52L1Q16890 204 aaPredicted RBP8.14□□□□□ -1.11
YBX3-204ENST00000366290 HS1BP3Q53T59 392 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 TCP11X2Q5H9J9 407 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 FAM78AQ5JUQ0 283 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 DNAJB7Q7Z6W7 309 aaPredicted RBP8.14□□□□□ -1.11
YBX3-204ENST00000366290 LMO3Q8TAP4 145 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 TAF4BQ92750 862 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 ATOH1Q92858 354 aaPredicted RBP8.14□□□□□ -1.11
YBX3-204ENST00000366290 SMARCD2Q92925 531 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 WWC2-AS2Q96NR7 200 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 DDX23Q9BUQ8 820 aaKnown RBP8.14□□□□□ -1.11
YBX3-204ENST00000366290 IMPG2Q9BZV3 1241 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 NAT10Q9H0A0 1025 aaKnown RBP8.14□□□□□ -1.11
YBX3-204ENST00000366290 MMRN2Q9H8L6 949 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 APOBEC3GQ9HC16 384 aaKnown RBP8.14□□□□□ -1.11
YBX3-204ENST00000366290 CD248Q9HCU0 757 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 TRPV5Q9NQA5 729 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 TMLHEQ9NVH6 421 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 CDH9Q9ULB4 789 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 COMMD10Q9Y6G5 202 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 KIF26AQ9ULI4 1882 aaPredicted RBP8.14□□□□□ -1.11
YBX3-204ENST00000366290 COL4A2P08572 1712 aa8.14□□□□□ -1.11
YBX3-204ENST00000366290 CACNA1AO00555 2505 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 FOXN3O00409 490 aaPredicted RBP8.13□□□□□ -1.11
YBX3-204ENST00000366290 DNAJB5O75953 348 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 CAVIN2O95810 425 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 ABHD16AO95870 558 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 ASS1P00966 412 aaKnown RBP8.13□□□□□ -1.11
YBX3-204ENST00000366290 AFPP02771 609 aaKnown RBP8.13□□□□□ -1.11
YBX3-204ENST00000366290 HMGA1P17096 107 aaKnown RBP8.13□□□□□ -1.11
YBX3-204ENST00000366290 GCSHP23434 173 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 LMO2P25791 158 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 EEF1GP26641 437 aaKnown RBP8.13□□□□□ -1.11
YBX3-204ENST00000366290 SERPINB3P29508 390 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 HTR3AP46098 478 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 MAN2A2P49641 1150 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 COPB1P53618 953 aaKnown RBP8.13□□□□□ -1.11
YBX3-204ENST00000366290 NHLH2Q02577 135 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 BIRC3Q13489 604 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 CRB2Q5IJ48 1285 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 METRNLQ641Q3 311 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 KRT39Q6A163 491 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 SPOPLQ6IQ16 392 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 DPY19L2P1Q6NXN4 242 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 VSTM1Q6UX27 236 aa8.13□□□□□ -1.11
YBX3-204ENST00000366290 TMEM150AQ86TG1 271 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms