RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PTDSS1P48651 473 aaKnown RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 RAP1GDS1P52306 607 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 AQP5P55064 265 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 SCAPQ12770 1279 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 STX3Q13277 289 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 FASTKD1Q53R41 847 aaKnown RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 LCE2CQ5TA81 110 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 FAM72AQ5TYM5 149 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 OLFML2BQ68BL8 750 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 FAM72DQ6L9T8 149 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 FAM72BQ86X60 149 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 TP53INP2Q8IXH6 220 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 CDKL2Q92772 493 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 KIAA1191Q96A73 305 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 NTAN1Q96AB6 310 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 ZNF778Q96MU6 729 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 LBHD1Q9BQE6 289 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 SIKE1Q9BRV8 207 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 CENPOQ9BU64 300 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 WWP1Q9H0M0 922 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 ZMAT4Q9H898 229 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 WDR6Q9NNW5 1121 aaKnown RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 SYBUQ9NX95 663 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 SAGE1Q9NXZ1 904 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 DCDC2Q9UHG0 476 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 STAP1Q9ULZ2 295 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 CCDC195A0A1B0GUA6 201 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 NRP1O14786 923 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 PLIN3O60664 434 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 MAGEC1O60732 1142 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 GLRA3O75311 464 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 AMHP03971 560 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 SERPINA6P08185 405 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 ITGA2BP08514 1039 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 ACAT1P24752 427 aaKnown RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 ADRA1BP35368 520 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 MAGEA12P43365 314 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 HCAR3P49019 387 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 RENBPP51606 427 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 CLNS1AP54105 237 aaKnown RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 GJA9P57773 515 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 SESN2P58004 480 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 TUBB3Q13509 450 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 FRG1Q14331 258 aaKnown RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 INSCQ1MX18 579 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 ACSBG2Q5FVE4 666 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 WSCD1Q658N2 575 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 CASC4Q6P4E1 433 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 TLK2Q86UE8 772 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 TMPRSS6Q8IU80 811 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 TEX9Q8N6V9 391 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 PGAP3Q96FM1 320 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 NAF1Q96HR8 494 aaKnown RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 CEP41Q9BYV8 373 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 PIH1D1Q9NWS0 290 aaKnown RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 PLA2G4CQ9UP65 541 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 SIT1Q9Y3P8 196 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 RAD54BQ9Y620 910 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 EEF2KO00418 725 aaKnown RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 ITM2AO43736 263 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 PQBP1O60828 265 aaKnown RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 ZNF189O75820 626 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 RPL10P27635 214 aaKnown RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 TKTL1P51854 596 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 DEUP1Q05D60 604 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 GBX1Q14549 363 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 PCLAFQ15004 111 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 RAB41Q5JT25 222 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 SPANXN3Q5MJ09 141 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 TEDDM1Q5T9Z0 273 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 N4BP2L1Q5TBK1 243 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 KCTD11Q693B1 232 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 ATG14Q6ZNE5 492 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 ZCCHC23Q6ZST2 131 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 NME8Q8N427 588 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 OR6Y1Q8NGX8 325 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 WDR60Q8WVS4 1066 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 LENG1Q96BZ8 264 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 MIEF2Q96C03 454 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 PARK7Q99497 189 aaKnown RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 FERMT1Q9BQL6 677 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 ASPNQ9BXN1 380 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 LRRC4Q9HBW1 653 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 FLRT1Q9NZU1 646 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 COL4A4P53420 1690 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 DYTNA2CJ06 578 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 FAM170BA6NMN3 283 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 YJEFN3A6XGL0 299 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 H3BS24 57 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 AP2A1O95782 977 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 PROCP04070 461 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 POLBP06746 335 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 KITP10721 976 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 ERCC2P18074 760 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 PTPN3P26045 913 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 ETV3P41162 512 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 MAP3K7CLP57077 242 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 DAOAP59103 153 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 SRSF11Q05519 484 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms