RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ENGASEQ8NFI3 743 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 TAMM41Q96BW9 452 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 OR52E6Q96RD3 313 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 SPG21Q9NZD8 308 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 SPEF1Q9Y4P9 236 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 CITO14578 2027 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ZCCHC11Q5TAX3 1644 aaKnown RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 KANTRA0A1W2PQU2 76 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ANXA2P2A6NMY6 339 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 PAPSS2O95340 614 aaPredicted RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ANXA2P07355 339 aaKnown RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 TFAP2DQ7Z6R9 452 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 PQLC1Q8N2U9 271 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 TNKS2Q9H2K2 1166 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 TPK1Q9H3S4 243 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 SPTLC1O15269 473 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ENTPD5O75356 428 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 SP8Q8IXZ3 490 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 PM20D2Q8IYS1 436 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 OR4A15Q8NGL6 344 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 BAP1Q92560 729 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 MKL1Q969V6 931 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 COPS4Q9BT78 406 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ACAT2Q9BWD1 397 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ATXN3LQ9H3M9 355 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 UBAP2LQ14157 1087 aaKnown RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 PARP6Q2NL67 630 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 PDCD4Q53EL6 469 aaKnown RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 STXBP5Q5T5C0 1151 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 GPRIN3Q6ZVF9 776 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 MCOLN2Q8IZK6 566 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 ZNF433Q8N7K0 673 aaPredicted RBP9.32□□□□□ -0.92
VPS13A-203ENST00000360280 MYH7BA7E2Y1 1941 aa9.32□□□□□ -0.92
VPS13A-203ENST00000360280 KPNA3O00505 521 aaPredicted RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 RAB27AP51159 221 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 CLCN5P51795 746 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 RASGEF1BQ0VAM2 473 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ABRAQ8N0Z2 381 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ZNF563Q8TA94 476 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ELOVL4Q9GZR5 314 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 FAM237BA0A1B0GVD1 139 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 NDUFB10O96000 172 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 HSD3B1P14060 373 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 HOXC12P31275 282 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 RAB10P61026 200 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 KATNAL2Q8IYT4 538 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 C2orf49Q9BVC5 232 aaPredicted RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 PAK6Q9NQU5 681 aaPredicted RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 SEC14L3Q9UDX4 400 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 CLTCL1P53675 1640 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 SPATA31E1Q6ZUB1 1445 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 SLC12A8A0AV02 714 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 CARNS1A5YM72 827 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ISLR2Q6UXK2 745 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 TMEM17Q86X19 198 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 NARFQ9UHQ1 456 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 DGKBQ9Y6T7 804 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 SETBP1Q9Y6X0 1596 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ITGAVP06756 1048 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 PSKH1P11801 424 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 THPOP40225 353 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 SLC25A3Q00325 362 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ELAVL2Q12926 359 aaKnown RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 PCID2Q5JVF3 399 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 MOXD1Q6UVY6 613 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ZNF730Q6ZMV8 503 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 TMEM192Q8IY95 271 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 MBOAT7Q96N66 472 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 NEUROD4Q9HD90 331 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 MRPS33Q9Y291 106 aaKnown RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 TRIM64A6NGJ6 449 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 WEE1P30291 646 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 PRKAG1P54619 331 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 RRP1BQ14684 758 aaKnown RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 RIT1Q92963 219 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 OR1I1O60431 355 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 USP43Q70EL4 1123 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 AMIGO1Q86WK6 493 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ETNPPLQ8TBG4 499 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 SCGB3A2Q96PL1 93 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 METTL8Q9H825 291 aaKnown RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 QTRT2Q9H974 415 aaKnown RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 NYAP2Q9P242 653 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 M0R036 132 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ADAMDEC1O15204 470 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 IFI30P13284 250 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 NCK1P16333 377 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 KCNA5P22460 613 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 IFI35P80217 286 aaPredicted RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 DDR1Q08345 913 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ZCCHC12Q6PEW1 402 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 RBMX2Q9Y388 322 aaKnown RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 TSHRP16473 764 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 MAGEE1Q9HCI5 957 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 DAGLAQ9Y4D2 1042 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ALG5Q9Y673 324 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 RPL38P63173 70 aaKnown RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 PTPAQ15257 358 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 KLK14Q9P0G3 267 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 MYO5BQ9ULV0 1848 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms