RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 ENDOVQ8N8Q3 282 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 TXNDC5Q8NBS9 432 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 OR13C4Q8NGS5 318 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 DIS3LQ8TF46 1054 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 CDKN2AIPNLQ96HQ2 116 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 CCDC28BQ9BUN5 200 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 ZNF334Q9HCZ1 680 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 SMPD4Q9NXE4 827 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 SLC22A2O15244 555 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 BAIAP3O94812 1187 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 LUC7L3O95232 432 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 PENKP01210 267 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 TFEBP19484 476 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 STC1P52823 247 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 COPAP53621 1224 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 ARF5P84085 180 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 SLC9B1Q4ZJI4 515 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 GLT6D1Q7Z4J2 308 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 LDB1Q86U70 411 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 LSMEM2Q8N112 164 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 SPATA6LQ8N4H0 392 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 CARNMT1Q8N4J0 409 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 AFAP1L2Q8N4X5 818 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 CCNYL1Q8N7R7 359 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 TMA16Q96EY4 203 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 FAR2Q96K12 515 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 TCF12Q99081 682 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 SUDS3Q9H7L9 328 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 DCLRE1BQ9H816 532 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 EBF2Q9HAK2 575 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 EML4Q9HC35 981 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 LSM7Q9UK45 103 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 PLA2G4CQ9UP65 541 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 ZNF510Q9Y2H8 683 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 L3MBTL1Q9Y468 752 aa18.33■□□□□ 0.52
PDLIM7-203ENST00000359895 TEX28O15482 410 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 ZMPSTE24O75844 475 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 TM7SF2O76062 418 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 IPO13O94829 963 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 TMCC1O94876 653 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 PIRTP0C851 137 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 HDCP19113 662 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 PMLP29590 882 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 SUOXP51687 545 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 CDKN2DP55273 166 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 C6orf163Q5TEZ5 329 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 Q6ZNB5 142 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 TRIM67Q6ZTA4 783 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 RNF135Q8IUD6 432 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 FAM217AQ8IXS0 508 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 MAPK15Q8TD08 544 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 AUTS2Q8WXX7 1259 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 YME1L1Q96TA2 773 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 IL21Q9HBE4 155 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 HACD3Q9P035 362 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 ZDHHC2Q9UIJ5 367 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 CDYLQ9Y232 598 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 VPS9D1Q9Y2B5 631 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 SPO11Q9Y5K1 396 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 RAI2Q9Y5P3 530 aa18.32■□□□□ 0.52
PDLIM7-203ENST00000359895 TRPC5OSA6NMA1 111 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 GFRA2O00451 464 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 PFDN6O15212 129 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 GRID2O43424 1007 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 BUD23O43709 281 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 LILRB3O75022 631 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 CIB2O75838 187 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 PRLP01236 227 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 LPOP22079 712 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 ADSLP30566 484 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 GALNT1Q10472 559 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 NCEH1Q6PIU2 408 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 TMCO2Q7Z6W1 182 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 SCUBE1Q8IWY4 988 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 ARL14EPQ8N8R7 260 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 LPCAT1Q8NF37 534 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 MRPS31Q92665 395 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 USP13Q92995 863 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 SGF29Q96ES7 293 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 EXOC2Q96KP1 924 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 FEM1AQ9BSK4 669 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 AARSD1Q9BTE6 412 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 C11orf49Q9H6J7 331 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 CRYL1Q9Y2S2 319 aa18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 HELZP42694 1942 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-203ENST00000359895 A8MT66 165 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 KIAA0355O15063 1070 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 CSF2RAP15509 400 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 KLF10Q13118 480 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 PTPRCAPQ14761 206 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 NAA25Q14CX7 972 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 ZNF549Q6P9A3 640 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 NET1Q7Z628 596 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 TMEM199Q8N511 208 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 OR4K2Q8NGD2 314 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 AGR3Q8TD06 166 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 ADAMTS19Q8TE59 1207 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 ANKRD49Q8WVL7 239 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 NSMCE3Q96MG7 304 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 CYP2S1Q96SQ9 504 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms