RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CFAP52Q8N1V2 620 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 NAT8LQ8N9F0 302 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 TBATAQ96M53 351 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 HOPXQ9BPY8 73 aaPredicted RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 ZCCHC2Q9C0B9 1178 aaKnown RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 ARMC7Q9H6L4 198 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 AGO1Q9UL18 857 aaKnown RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 TBC1D30Q9Y2I9 924 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 PCDHB12Q9Y5F1 795 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 MON2Q7Z3U7 1717 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 TSC22D2O75157 780 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 PCDH8O95206 1070 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 GPD2P43304 727 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 NDUFV1P49821 464 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 CCNHP51946 323 aaPredicted RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 VPS26BQ4G0F5 336 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 DUSP28Q4G0W2 176 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 OFCC1Q8IZS5 231 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 AADATQ8N5Z0 425 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 DQX1Q8TE96 717 aaKnown RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 CENPIQ92674 756 aaPredicted RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 PROX1Q92786 737 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 LENG1Q96BZ8 264 aaPredicted RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 C19orf60Q96EN9 201 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 AGAP2Q99490 1192 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 GORASP1Q9BQQ3 440 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 ZNF358Q9NW07 568 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 SPACA6W5XKT8 324 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 FER1L4A9Z1Z3 1794 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 EFCAB10A6NFE3 127 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 TSPAN1O60635 241 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 SERPINI2O75830 405 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 LRATO95237 230 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 SEC24AO95486 1093 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 ZBTB11O95625 1053 aaPredicted RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 HPCAL1P37235 193 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 PSEN1P49768 467 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 IDH3AP50213 366 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 USP45Q70EL2 814 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 FSTL5Q8N475 847 aaPredicted RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 CMASQ8NFW8 434 aaPredicted RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 OR52E6Q96RD3 313 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 CCDC28BQ9BUN5 200 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 TMPRSS4Q9NRS4 437 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 SLC7A8Q9UHI5 535 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 CYP7B1O75881 506 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 ALDH1A2O94788 518 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 HDCP19113 662 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 MC4RP32245 332 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 ICAM3P32942 547 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 GRIA1P42261 906 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 AMER2Q8N7J2 671 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 REXO5Q96IC2 774 aaKnown RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 GBA3Q9H227 469 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 EPB41L1Q9H4G0 881 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 ZDHHC6Q9H6R6 413 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 PCDH12Q9NPG4 1184 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 GNPTGQ9UJJ9 305 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 DMTF1Q9Y222 760 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 SAMHD1Q9Y3Z3 626 aaKnown RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 MANSC4A6NHS7 340 aaPredicted RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 DBTP11182 482 aaKnown RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 MYL12AP19105 171 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 NMBRP28336 390 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 PFKPQ01813 784 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 MBTD1Q05BQ5 628 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 TOP3AQ13472 1001 aaPredicted RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 TSNQ15631 228 aaKnown RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 NOMO2Q5JPE7 1267 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 TRIQKQ629K1 86 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 TXNDC11Q6PKC3 985 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 EPHX4Q8IUS5 362 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 TBC1D21Q8IYX1 336 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 OR2T12Q8NG77 320 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 OR4K2Q8NGD2 314 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 GRIN3AQ8TCU5 1115 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 ELMO1Q92556 727 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 PANX1Q96RD7 426 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 MRPL9Q9BYD2 267 aaKnown RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 FETUBQ9UGM5 382 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 HMGXB4Q9UGU5 601 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 KAT6AQ92794 2004 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 KLRG2A4D1S0 409 aaPredicted RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 H0YGN5 161 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 MYL12BO14950 172 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 OR4Q2P0C623 313 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 TAS2R39P59534 338 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 ZCCHC8Q6NZY4 707 aaKnown RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 DENND6AQ8IWF6 608 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 CPSF7Q8N684 471 aaKnown RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 CNTD1Q8N815 330 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 STARD8Q92502 1023 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 ABCB10Q9NRK6 738 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 PRKAG3Q9UGI9 489 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 GIT1Q9Y2X7 761 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 SNX10Q9Y5X0 201 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 NFS1Q9Y697 457 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 PRKCQQ04759 706 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms