RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 MAELQ96JY0 434 aaKnown RBP15.3■□□□□ 0.04
PTBP1-203ENST00000356948 EXOC2Q96KP1 924 aa15.3■□□□□ 0.04
PTBP1-203ENST00000356948 PIF1Q9H611 641 aa15.3■□□□□ 0.04
PTBP1-203ENST00000356948 TMCO1Q9UM00 188 aa15.3■□□□□ 0.04
PTBP1-203ENST00000356948 ANKRD6Q9Y2G4 727 aa15.3■□□□□ 0.04
PTBP1-203ENST00000356948 H3BSA7 217 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 MTSS1O43312 755 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 CELF2O95319 508 aaKnown RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 ZNF26P17031 533 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 ARPP19P56211 112 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 TIAL1Q01085 375 aaKnown RBP eCLIP15.29■□□□□ 0.043e-9■□□□□ 10.3
PTBP1-203ENST00000356948 LRP8Q14114 963 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 VPS26BQ4G0F5 336 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 SPRYD7Q5W111 196 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 SMYD5Q6GMV2 418 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 PRICKLE1Q96MT3 831 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 MRPL57Q9BQC6 102 aaKnown RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 ARHGAP39Q9C0H5 1083 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 GSTO2Q9H4Y5 243 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 PFDN4Q9NQP4 134 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 UXTQ9UBK9 157 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 NCF1BA6NI72 391 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 NCF1CA8MVU1 366 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 UBXN8O00124 270 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 PSMD12O00232 456 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 TNFRSF10BO14763 440 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 UBDO15205 165 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 TSPAN3O60637 253 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 IPO13O94829 963 aaKnown RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 PABPC4LP0CB38 370 aaKnown RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 NCF1P14598 390 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 CDKN1CP49918 316 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 CDC42EP1Q00587 391 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 EFEMP1Q12805 493 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 ANKRD23Q86SG2 305 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 ISCA2Q86U28 154 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 ATAD1Q8NBU5 361 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 BLOC1S5Q8TDH9 187 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 EME1Q96AY2 570 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 TSGA13Q96PP4 275 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 ADAM2Q99965 735 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 GALPQ9UBC7 116 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 SLC27A5Q9Y2P5 690 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 PRG3Q9Y2Y8 225 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 PTCH2Q9Y6C5 1203 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 ZNF236Q9UL36 1845 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 GNAO1P09471 354 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 ATP5F1P24539 256 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 CPT1AP50416 773 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 SLC7A2P52569 658 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 AIF1P55008 147 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 AAK1Q2M2I8 961 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 CPNE9Q8IYJ1 553 aa15.29■□□□□ 0.04
PTBP1-203ENST00000356948 PRPF19Q9UMS4 504 aaKnown RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 RBMX2Q9Y388 322 aaKnown RBP15.29■□□□□ 0.04
PTBP1-203ENST00000356948 CROCCQ5TZA2 2017 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 FOXD2O60548 495 aaPredicted RBP15.28■□□□□ 0.04
PTBP1-203ENST00000356948 ANXA9O76027 345 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 PCSK1P29120 753 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 PRDX3P30048 256 aaKnown RBP15.28■□□□□ 0.04
PTBP1-203ENST00000356948 SIRPB2Q5JXA9 342 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 C6orf10Q5SRN2 563 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 RAP1GAP2Q684P5 730 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 KLHDC10Q6PID8 442 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 TMEM86AQ8N2M4 240 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 ZC3H15Q8WU90 426 aaKnown RBP15.28■□□□□ 0.04
PTBP1-203ENST00000356948 RSPH1Q8WYR4 309 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 SERPINI1Q99574 410 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 POLR3BQ9NW08 1133 aaPredicted RBP15.28■□□□□ 0.04
PTBP1-203ENST00000356948 C6orf203Q9P0P8 240 aaPredicted RBP15.28■□□□□ 0.04
PTBP1-203ENST00000356948 EVLQ9UI08 416 aaPredicted RBP15.28■□□□□ 0.04
PTBP1-203ENST00000356948 TSC22D4Q9Y3Q8 395 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 V9GYQ6 96 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 TMX2-CTNND1H3BSU7 103 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 OR4D1Q15615 310 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 KLC3Q6P597 504 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 CILP2Q8IUL8 1156 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 HBEGFQ99075 208 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 PARK7Q99497 189 aaKnown RBP15.28■□□□□ 0.04
PTBP1-203ENST00000356948 SENP6Q9GZR1 1112 aaPredicted RBP15.28■□□□□ 0.04
PTBP1-203ENST00000356948 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.28■□□□□ 0.04
PTBP1-203ENST00000356948 TRAF6Q9Y4K3 522 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 TIMM22Q9Y584 194 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 PSMC3P17980 439 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 PBX3P40426 434 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 PRKAA2P54646 552 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 RARS2Q5T160 578 aaKnown RBP15.28■□□□□ 0.04
PTBP1-203ENST00000356948 HERC6Q8IVU3 1022 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 MARVELD2Q8N4S9 558 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 CANT1Q8WVQ1 401 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 TEX37Q96LM6 180 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 ACBD6Q9BR61 282 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 SOX17Q9H6I2 414 aaPredicted RBP15.28■□□□□ 0.04
PTBP1-203ENST00000356948 TRMT13Q9NUP7 481 aaKnown RBP15.28■□□□□ 0.04
PTBP1-203ENST00000356948 SLC38A7Q9NVC3 462 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 PCDH10Q9P2E7 1040 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 PHF24Q9UPV7 400 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 FAM50BQ9Y247 325 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 VWA7Q9Y334 891 aa15.28■□□□□ 0.04
PTBP1-203ENST00000356948 LINC00032P0C843 101 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms