RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 GTF2IRD2BQ6EKJ0 949 aa18.96■□□□□ 0.63
PRPF39-201ENST00000355765 USP51Q70EK9 711 aa18.96■□□□□ 0.63
PRPF39-201ENST00000355765 FRA10AC1Q70Z53 315 aa18.96■□□□□ 0.63
PRPF39-201ENST00000355765 GTF2IRD2Q86UP8 949 aa18.96■□□□□ 0.63
PRPF39-201ENST00000355765 PNPLA1Q8N8W4 532 aa18.96■□□□□ 0.63
PRPF39-201ENST00000355765 IL12RB2Q99665 862 aa18.96■□□□□ 0.63
PRPF39-201ENST00000355765 PSD2Q9BQI7 771 aa18.96■□□□□ 0.63
PRPF39-201ENST00000355765 C11orf84Q9BUA3 381 aaPredicted RBP18.96■□□□□ 0.63
PRPF39-201ENST00000355765 HMG20AQ9NP66 347 aa18.96■□□□□ 0.63
PRPF39-201ENST00000355765 ERVK-11Q9UQG0 969 aa18.96■□□□□ 0.63
PRPF39-201ENST00000355765 BDNFP23560 247 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 TKTP29401 623 aaKnown RBP18.95■□□□□ 0.62
PRPF39-201ENST00000355765 RFC2P35250 354 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 TAS2R39P59534 338 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 AMHR2Q16671 573 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 R3HCC1LQ7Z5L2 792 aaKnown RBP18.95■□□□□ 0.62
PRPF39-201ENST00000355765 CENPIQ92674 756 aaPredicted RBP18.95■□□□□ 0.62
PRPF39-201ENST00000355765 FZD10Q9ULW2 581 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 MAGED1Q9Y5V3 778 aaPredicted RBP18.95■□□□□ 0.62
PRPF39-201ENST00000355765 FAM47E-STBD1D6RA91 191 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 NFKB1P19838 968 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 CAPN3P20807 821 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 ATP5F1P24539 256 aaPredicted RBP18.95■□□□□ 0.62
PRPF39-201ENST00000355765 ALDH4A1P30038 563 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 FRG1Q14331 258 aaKnown RBP18.95■□□□□ 0.62
PRPF39-201ENST00000355765 AGAP7PQ5VUJ5 663 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 IRAK1BP1Q5VVH5 260 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 CYHR1Q6ZMK1 362 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 ANKRD13BQ86YJ7 626 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 FAM149B1Q96BN6 582 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 CNDP2Q96KP4 475 aaKnown RBP18.95■□□□□ 0.62
PRPF39-201ENST00000355765 ATP13A3Q9H7F0 1226 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 VTA1Q9NP79 307 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 SCHIP1Q9P0W5 487 aaPredicted RBP18.95■□□□□ 0.62
PRPF39-201ENST00000355765 MTRRQ9UBK8 725 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 USP22Q9UPT9 525 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 IQCF3P0C7M6 154 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 CD68P34810 354 aaPredicted RBP18.95■□□□□ 0.62
PRPF39-201ENST00000355765 SULT1E1P49888 294 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 LSM3P62310 102 aaKnown RBP18.95■□□□□ 0.62
PRPF39-201ENST00000355765 INCA1Q0VD86 236 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 FAM83EQ2M2I3 478 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 FUT11Q495W5 492 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 PKDCCQ504Y2 493 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 LCN8Q6JVE9 175 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 SLCO6A1Q86UG4 719 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 ACTR3BQ9P1U1 418 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 ATP11BQ9Y2G3 1177 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 NME7Q9Y5B8 376 aa18.95■□□□□ 0.62
PRPF39-201ENST00000355765 PSME4Q14997 1843 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 H0Y858 1186 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 ACKR2O00590 384 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 CES1P23141 567 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 HTR1BP28222 390 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 RABL3Q5HYI8 236 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 HACD2Q6Y1H2 254 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 PARP8Q8N3A8 854 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 AFAP1L2Q8N4X5 818 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 DNAJB14Q8TBM8 379 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 CAPSLQ8WWF8 208 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 CTRCQ99895 268 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 RHOBTB2Q9BYZ6 727 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 TLR9Q9NR96 1032 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 SETD4Q9NVD3 440 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 A8MT66 165 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 FXYD1O00168 92 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 AURKAO14965 403 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 MSI1O43347 362 aaKnown RBP18.94■□□□□ 0.62
PRPF39-201ENST00000355765 ABCB7O75027 752 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 GPX3P22352 226 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 TGM1P22735 817 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 PAX3P23760 479 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 MAPRE1Q15691 268 aaKnown RBP18.94■□□□□ 0.62
PRPF39-201ENST00000355765 IER5Q5VY09 327 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 PNPT1Q8TCS8 783 aaKnown RBP18.94■□□□□ 0.62
PRPF39-201ENST00000355765 PTCD2Q8WV60 388 aaKnown RBP18.94■□□□□ 0.62
PRPF39-201ENST00000355765 ROPN1LQ96C74 230 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 DPEP3Q9H4B8 488 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 AKIP1Q9NQ31 210 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 DSEQ9UL01 958 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 VWA7Q9Y334 891 aa18.94■□□□□ 0.62
PRPF39-201ENST00000355765 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.93■□□□□ 0.62
PRPF39-201ENST00000355765 UBFD1O14562 309 aaKnown RBP18.93■□□□□ 0.62
PRPF39-201ENST00000355765 ANGPT2O15123 496 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 JUNBP17275 347 aaPredicted RBP18.93■□□□□ 0.62
PRPF39-201ENST00000355765 CYP2B6P20813 491 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 HADHAP40939 763 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 TRIM32Q13049 653 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 POU6F1Q14863 301 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 GADL1Q6ZQY3 521 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 SLC16A12Q6ZSM3 486 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 SPARTQ8N0X7 666 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 CGREF1Q99674 301 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 MRPL57Q9BQC6 102 aaKnown RBP18.93■□□□□ 0.62
PRPF39-201ENST00000355765 CDHR5Q9HBB8 845 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 NUP205Q92621 2012 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 LDLRP01130 860 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 UBA1P22314 1058 aaKnown RBP18.93■□□□□ 0.62
PRPF39-201ENST00000355765 SLC6A2P23975 617 aa18.93■□□□□ 0.62
PRPF39-201ENST00000355765 INAQ16352 499 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms