RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 CYP2R1Q6VVX0 501 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 UBE2R2Q712K3 238 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 FUKQ8N0W3 1084 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 ATG16L2Q8NAA4 619 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 DTLQ9NZJ0 730 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 RASSF10A6NK89 507 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 NDUFB5O43674 189 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 POP4O95707 220 aaKnown RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 RPS24P62847 133 aaKnown RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 FASTKD3Q14CZ7 662 aaKnown RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 FAM98BQ52LJ0 330 aaKnown RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 ATXN7L2Q5T6C5 722 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 TXNDC11Q6PKC3 985 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 MAMDC4Q6UXC1 1216 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 COLGALT2Q8IYK4 626 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 RDH11Q8TC12 318 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 USP7Q93009 1102 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 MFSD3Q96ES6 412 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 ACAT2Q9BWD1 397 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 NMUR1Q9HB89 426 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 PHPT1Q9NRX4 125 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 LIMD1Q9UGP4 676 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 CDK14O94921 469 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 OTCP00480 354 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 C21orf59P57076 290 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 IRX1P78414 480 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 CEP68Q76N32 757 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 ARCQ7LC44 396 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 TRABD2AQ86V40 505 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 EFCAB3Q8N7B9 438 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 STYXQ8WUJ0 223 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 GDAP2Q9NXN4 497 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 TELO2Q9Y4R8 837 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 ARIH1Q9Y4X5 557 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 KRT87PA6NCN2 255 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 SAC3D1A6NKF1 404 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 PROCP04070 461 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 PKMP14618 531 aaKnown RBP14.92□□□□□ -0.02
COL17A1-201ENST00000353479 PDK4Q16654 411 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 TRMT5Q32P41 509 aaKnown RBP14.92□□□□□ -0.02
COL17A1-201ENST00000353479 PLD3Q8IV08 490 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 PCDH20Q8N6Y1 951 aaKnown RBP14.92□□□□□ -0.02
COL17A1-201ENST00000353479 HEXDCQ8WVB3 486 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 CENPTQ96BT3 561 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 RAB23Q9ULC3 237 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 COL2A1P02458 1487 aaPredicted RBP14.92□□□□□ -0.02
COL17A1-201ENST00000353479 LYPLA1O75608 230 aaPredicted RBP14.92□□□□□ -0.02
COL17A1-201ENST00000353479 PCCBP05166 539 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 CDH13P55290 713 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 RPS7P62081 194 aaKnown RBP14.92□□□□□ -0.02
COL17A1-201ENST00000353479 RPL38P63173 70 aaKnown RBP14.92□□□□□ -0.02
COL17A1-201ENST00000353479 ZBTB17Q13105 803 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 HNRNPDQ14103 355 aaKnown RBP14.92□□□□□ -0.02
COL17A1-201ENST00000353479 DCLRE1BQ9H816 532 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 FAM47E-STBD1D6RA91 191 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 KELP23276 732 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 EDNRBP24530 442 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 NTSP30990 170 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 GDF10P55107 478 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 ASZ1Q8WWH4 475 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 AP2M1Q96CW1 435 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 HAPLN3Q96S86 360 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 HEPHQ9BQS7 1158 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 PIGVQ9NUD9 493 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 SLC17A7Q9P2U7 560 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 INVSQ9Y283 1065 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 SLC27A6Q9Y2P4 619 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 TCAF1Q9Y4C2 921 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 PRAMEF1O95521 474 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 LRPAP1P30533 357 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 CXCR3P49682 368 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 CACNG1Q06432 222 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 DPYSL2Q16555 572 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 RNASEH2BQ5TBB1 312 aaKnown RBP14.92□□□□□ -0.02
COL17A1-201ENST00000353479 TXNDC8Q6A555 127 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 HFE2Q6ZVN8 426 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 TMEM110Q86TL2 294 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 BTN2A2Q8WVV5 523 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 SLC44A1Q8WWI5 657 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 ARMC7Q9H6L4 198 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 SIX4Q9UIU6 781 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 KCNE2Q9Y6J6 123 aa14.92□□□□□ -0.02
COL17A1-201ENST00000353479 SERPINI2O75830 405 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 EPN2O95208 641 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 C2P06681 752 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 PRKAG1P54619 331 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 AP1S1P61966 158 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 CBX2Q14781 532 aaPredicted RBP14.91□□□□□ -0.02
COL17A1-201ENST00000353479 TAS1R3Q7RTX0 852 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 PTCD2Q8WV60 388 aaKnown RBP14.91□□□□□ -0.02
COL17A1-201ENST00000353479 EMID1Q96A84 441 aaPredicted RBP14.91□□□□□ -0.02
COL17A1-201ENST00000353479 KRT84Q9NSB2 600 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 RAP2CQ9Y3L5 183 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 H0Y858 1186 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 FCGR1AP12314 374 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 ATP6V1B1P15313 513 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 RFC2P35250 354 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 CSKP41240 450 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 PKNOX1P55347 436 aa14.91□□□□□ -0.02
COL17A1-201ENST00000353479 MPP1Q00013 466 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms