RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 PTPRRQ15256 657 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 RALGPS1Q5JS13 557 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 C6orf132Q5T0Z8 1188 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 ENPP7Q6UWV6 458 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 EFL1Q7Z2Z2 1120 aaKnown RBP13.33□□□□□ -0.28
CLCC1-202ENST00000348264 LRRC49Q8IUZ0 686 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 CACTIN-AS1Q8N1I8 211 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 SLC35G2Q8TBE7 412 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 LRRN4Q8WUT4 740 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 RAPGEF5Q92565 580 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 MAML1Q92585 1016 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 FUBP1Q96AE4 644 aaKnown RBP13.33□□□□□ -0.28
CLCC1-202ENST00000348264 COQ10AQ96MF6 247 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 WDR92Q96MX6 357 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 NHEJ1Q9H9Q4 299 aaPredicted RBP13.33□□□□□ -0.28
CLCC1-202ENST00000348264 FGF22Q9HCT0 170 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 EVA1BQ9NVM1 165 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 KLQ9UEF7 1012 aa13.33□□□□□ -0.28
CLCC1-202ENST00000348264 IGSF10Q6WRI0 2623 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 EME2A4GXA9 379 aaPredicted RBP13.32□□□□□ -0.28
CLCC1-202ENST00000348264 TMEM202A6NGA9 273 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 NPIPB15A6NHN6 443 aaPredicted RBP13.32□□□□□ -0.28
CLCC1-202ENST00000348264 CASC3O15234 703 aaKnown RBP13.32□□□□□ -0.28
CLCC1-202ENST00000348264 YY2O15391 372 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 HEXIM1O94992 359 aaKnown RBP13.32□□□□□ -0.28
CLCC1-202ENST00000348264 RASGRP1O95267 797 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 ANXA6P08133 673 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 TPM1P09493 284 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 TGM2P21980 687 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 VIPR1P32241 457 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 BLKP51451 505 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 DSC2Q02487 901 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 SLC10A2Q12908 348 aaPredicted RBP13.32□□□□□ -0.28
CLCC1-202ENST00000348264 IHHQ14623 411 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 RTP5Q14D33 572 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 NR0B2Q15466 257 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 PERM1Q5SV97 790 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 ALG1LQ6GMV1 187 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 ESRP1Q6NXG1 681 aaKnown RBP13.32□□□□□ -0.28
CLCC1-202ENST00000348264 C19orf48Q6RUI8 117 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 CRTC1Q6UUV9 634 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 RD3Q7Z3Z2 195 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 TSPAN33Q86UF1 283 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 FSTL5Q8N475 847 aaPredicted RBP13.32□□□□□ -0.28
CLCC1-202ENST00000348264 KYQ8NBH2 561 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 MAPK15Q8TD08 544 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 OR1E3Q8WZA6 343 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 NUS1Q96E22 293 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 CCDC42Q96M95 316 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 SMIM14Q96QK8 99 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 MCCC1Q96RQ3 725 aaPredicted RBP13.32□□□□□ -0.28
CLCC1-202ENST00000348264 SEMA3CQ99985 751 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 LGR4Q9BXB1 951 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 NRSN2Q9GZP1 204 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 NCKIPSDQ9NZQ3 722 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 LCMT1Q9UIC8 334 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
CLCC1-202ENST00000348264 ZFC3H1O60293 1989 aaKnown RBP13.32□□□□□ -0.28
CLCC1-202ENST00000348264 A0A0U1RQS6 177 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 A0A1W2PQ67 120 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 LRRD1A4D1F6 860 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 CACNB4O00305 520 aaPredicted RBP13.31□□□□□ -0.28
CLCC1-202ENST00000348264 MATN3O15232 486 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 TLX3O43711 291 aaPredicted RBP13.31□□□□□ -0.28
CLCC1-202ENST00000348264 BRINP1O60477 761 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 MTA2O94776 668 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 PDHA1P08559 390 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 ALPIP09923 528 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 CTPS1P17812 591 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 KDELR1P24390 212 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 TRIM23P36406 574 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 ETV3P41162 512 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 TBX2Q13207 712 aaPredicted RBP13.31□□□□□ -0.28
CLCC1-202ENST00000348264 ELOCQ15369 112 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 IFI16Q16666 785 aaKnown RBP13.31□□□□□ -0.28
CLCC1-202ENST00000348264 TSR1Q2NL82 804 aaKnown RBP13.31□□□□□ -0.28
CLCC1-202ENST00000348264 ZFYVE27Q5T4F4 411 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 ARMC12Q5T9G4 340 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 DENND2CQ68D51 928 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 HSD11B1LQ7Z5J1 315 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 CNGA4Q8IV77 575 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 MAP7D3Q8IWC1 876 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLCC1-202ENST00000348264 OR56A4Q8NGH8 313 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 ATL2Q8NHH9 583 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 PIH1D2Q8WWB5 315 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 DTD2Q96FN9 168 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 TSGA13Q96PP4 275 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 POLR1EQ9GZS1 481 aaKnown RBP13.31□□□□□ -0.28
CLCC1-202ENST00000348264 WDR26Q9H7D7 661 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 MRPL40Q9NQ50 206 aaKnown RBP13.31□□□□□ -0.28
CLCC1-202ENST00000348264 DTLQ9NZJ0 730 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 SIRPGQ9P1W8 387 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 PHTF1Q9UMS5 762 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 TTLL3Q9Y4R7 772 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 RAI2Q9Y5P3 530 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 AK5Q9Y6K8 562 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 DGKBQ9Y6T7 804 aa13.31□□□□□ -0.28
CLCC1-202ENST00000348264 AHCTF1Q8WYP5 2266 aa13.3□□□□□ -0.28
CLCC1-202ENST00000348264 SMG1Q96Q15 3661 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms