RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CLDN7O95471 211 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 SLC4A1P02730 911 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 ADRB3P13945 408 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 RPS9P46781 194 aaKnown RBP19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 NEK3P51956 506 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 PMS2P54278 862 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 TAS2R38P59533 333 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 POLR2LP62875 67 aaKnown RBP19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 FAM193AP78312 1265 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 UAP1Q16222 522 aaPredicted RBP19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 BEND6Q5SZJ8 279 aaPredicted RBP19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 AGBL4Q5VU57 503 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 FBXL19Q6PCT2 694 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 KIAA1324Q6UXG2 1013 aaKnown RBP19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 CAPN12Q6ZSI9 719 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 USP45Q70EL2 814 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 PPHLN1Q8NEY8 458 aaKnown RBP19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 BRSK1Q8TDC3 778 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 PYROXD1Q8WU10 500 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 HMGB4Q8WW32 186 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 LRRC39Q96DD0 335 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 SIPA1Q96FS4 1042 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 PPP1R16AQ96I34 528 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 LRRC4CQ9HCJ2 640 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 DYRK4Q9NR20 520 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 NUMA1Q14980 2115 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 TMEM221A6NGB7 291 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 M0R296 226 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 CCL22O00626 93 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 AREL1O15033 823 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 SSTR1P30872 391 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 VIPR1P32241 457 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 MMP12P39900 470 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 DGKEP52429 567 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 SLMAPQ14BN4 828 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 TMEM31Q5JXX7 168 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 TSTD2Q5T7W7 516 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 ESRP1Q6NXG1 681 aaKnown RBP19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 UNC5AQ6ZN44 842 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 RFLNAQ6ZTI6 216 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 DPPA4Q7L190 304 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 GLT6D1Q7Z4J2 308 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 UNC5BQ8IZJ1 945 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 SPEM1Q8N4L4 309 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 FAM131CQ96AQ9 280 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 MFSD3Q96ES6 412 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 TSPYL1Q9H0U9 437 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 POLMQ9NP87 494 aaPredicted RBP19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 FBXL12Q9NXK8 326 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 ZC3H7BQ9UGR2 993 aaKnown RBP19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 EBF1Q9UH73 591 aa19.04■□□□□ 0.64
CHMP4A-201ENST00000347519 C1orf232A0A0U1RR37 186 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 HEATR9A2RTY3 570 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 RNASEH2AO75792 299 aaKnown RBP19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 DNTTP04053 509 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 C1SP09871 688 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 PGAM1P18669 254 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 XPAP23025 273 aaPredicted RBP19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 ZNF140P52738 457 aaPredicted RBP19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 TMPRSS15P98073 1019 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 TAF1AQ15573 450 aaPredicted RBP19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 SMAD1Q15797 465 aaKnown RBP19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 CNGA3Q16281 694 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 ANKRD20A4Q4UJ75 823 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 STEAP4Q687X5 459 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 LRRC66Q68CR7 880 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 TMEM135Q86UB9 458 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 OR13C4Q8NGS5 318 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 ZNF669Q96BR6 464 aaPredicted RBP19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 DNAJC1Q96KC8 554 aaKnown RBP19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 GPR63Q9BZJ6 419 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 EPHX3Q9H6B9 360 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 MRM3Q9HC36 420 aaKnown RBP19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 BPIFA1Q9NP55 256 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 TREX1Q9NSU2 369 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 HACD3Q9P035 362 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 SAMD15Q9P1V8 674 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 FADS3Q9Y5Q0 445 aa19.03■□□□□ 0.64
CHMP4A-201ENST00000347519 ZCWPW2A0A1B0GU75 182 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 FAM237BA0A1B0GVD1 139 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 GOLGA8CPA6NN73 597 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 ACSL3O95573 720 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 GM2AP17900 193 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 ARSDP51689 593 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 PTSQ03393 145 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 ANO7Q6IWH7 933 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 CEP128Q6ZU80 1094 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 NDUFAF2Q8N183 169 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 TSTD1Q8NFU3 115 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 OR4K2Q8NGD2 314 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 OR13J1Q8NGT2 312 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 UHMK1Q8TAS1 419 aaKnown RBP19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 GANCQ8TET4 914 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 HNRNPLLQ8WVV9 542 aaKnown RBP19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 OMDQ99983 421 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 WRAP53Q9BUR4 548 aaKnown RBP19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 IL1RAPL1Q9NZN1 696 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 IL17CQ9P0M4 197 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms