RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TMEM63AO94886 807 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 SLC25A14O95258 325 aaPredicted RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 PGM3O95394 542 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 ICAM3P32942 547 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 AIF1P55008 147 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 STX5Q13190 355 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 TAF13Q15543 124 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 POM121L1PQ3SYA9 428 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 ALFQ53S48 1182 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 PPM1JQ5JR12 505 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 RNF220Q5VTB9 566 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 IRGCQ6NXR0 463 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 PLD4Q96BZ4 506 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 TBCDQ9BTW9 1192 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 C3orf14Q9HBI5 128 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 NMRAL1Q9HBL8 299 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 SLC17A6Q9P2U8 582 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 OR12D3Q9UGF7 316 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 GTF2A1LQ9UNN4 478 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 HEBP2Q9Y5Z4 205 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 SAC3D1A6NKF1 404 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 NR5A2O00482 541 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 PIGNO95427 931 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 CLPTM1O96005 669 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 RBMS1P29558 406 aaKnown RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 RPL3P39023 403 aaKnown RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 FOXM1Q08050 763 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 TAF10Q12962 218 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 MPP2Q14168 576 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 LPCAT4Q643R3 524 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 PLEKHM3Q6ZWE6 761 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 TRIM69Q86WT6 500 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 TUBGCP3Q96CW5 907 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 SIPA1Q96FS4 1042 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 NKX1-2Q9UD57 310 aaPredicted RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 HMGXB4Q9UGU5 601 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 SNX6Q9UNH7 406 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 PPIEQ9UNP9 301 aaKnown RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 COL14A1Q05707 1796 aaKnown RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 JMJD7P0C870 316 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 ATXN1P54253 815 aaKnown RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 NRF1Q16656 503 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 ATP13A5Q4VNC0 1218 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 RBM15BQ8NDT2 890 aaKnown RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 THAP11Q96EK4 314 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 BTN2A3PQ96KV6 586 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 EBNA1BP2Q99848 306 aaKnown RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 ST6GALNAC4Q9H4F1 302 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 SFXN1Q9H9B4 322 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 PCDH18Q9HCL0 1135 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 CCDC167Q9P0B6 97 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 LZTS1Q9Y250 596 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 TELO2Q9Y4R8 837 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 TNPO3Q9Y5L0 923 aaKnown RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 AK5Q9Y6K8 562 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 E7ENQ6 273 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 INPPL1O15357 1258 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 TSPAN8P19075 237 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 IL1R2P27930 398 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 NAGLUP54802 743 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 CYP51A1Q16850 503 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 TMEM192Q8IY95 271 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 PARVBQ9HBI1 364 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 GTF2IRD1Q9UHL9 959 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 MYO5AQ9Y4I1 1855 aaKnown RBP10.91□□□□□ -0.66
CLCN6-202ENST00000346436 EDIL3O43854 480 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 CSTF2P33240 577 aaKnown RBP eCLIP10.91□□□□□ -0.66
CLCN6-202ENST00000346436 SERPINH1P50454 418 aaKnown RBP10.91□□□□□ -0.66
CLCN6-202ENST00000346436 PDX1P52945 283 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 RABGGTBP53611 331 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 OCA2Q04671 838 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 RIPK1Q13546 671 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 GRTP1Q5TC63 336 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 OR6Y1Q8NGX8 325 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 SLC44A1Q8WWI5 657 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 CADM1Q9BY67 442 aaKnown RBP10.91□□□□□ -0.66
CLCN6-202ENST00000346436 PRDM12Q9H4Q4 367 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 ZNF395Q9H8N7 513 aaPredicted RBP10.91□□□□□ -0.66
CLCN6-202ENST00000346436 ARL15Q9NXU5 204 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 KLF15Q9UIH9 416 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 AGO1Q9UL18 857 aaKnown RBP10.91□□□□□ -0.66
CLCN6-202ENST00000346436 TAF1P21675 1872 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 AKAP11Q9UKA4 1901 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 A0A0A0MRY4 1105 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 SLC25A12O75746 678 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 EPHA3P29320 983 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 IGFALSP35858 605 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 RPS7P62081 194 aaKnown RBP10.91□□□□□ -0.66
CLCN6-202ENST00000346436 OGDHQ02218 1023 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 UBE3AQ05086 875 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 PARP6Q2NL67 630 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 ZNF470Q6ECI4 717 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 ADGRD1Q6QNK2 874 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 CLEC4FQ8N1N0 589 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 CLIP3Q96DZ5 547 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 SPATA13Q96N96 652 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 GOLGA2P5Q9HBQ8 144 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 KRT84Q9NSB2 600 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 COQ4Q9Y3A0 265 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 NAA20P61599 178 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms