RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 FAM83DQ9H4H8 585 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 RAD21L1Q9H4I0 556 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 PNPLA8Q9NP80 782 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 INVSQ9Y283 1065 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 RHPN2P1A8MT19 583 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 ALADP13716 330 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 CSKP41240 450 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 VIPR2P41587 438 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 TWNKQ96RR1 684 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 P2RY13Q9BPV8 354 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 ACAT2Q9BWD1 397 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 FBXL12Q9NXK8 326 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 CNTRLQ7Z7A1 2325 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 TCN1P20061 433 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 CDKN2BP42772 138 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 PLIN5Q00G26 463 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 CACNG1Q06432 222 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 PLA2G4EQ3MJ16 856 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 CNSTQ6PJW8 725 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 FAIM2Q9BWQ8 316 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 TCF7L2Q9NQB0 619 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 CCDC88AQ3V6T2 1871 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 H3BM21 787 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 TGM5O43548 720 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 SNUPNO95149 360 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 HNF4AP41235 474 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 ATXN7L2Q5T6C5 722 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 PARGQ86W56 976 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 GALNT13Q8IUC8 556 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 SMARCD2Q92925 531 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 CLIP3Q96DZ5 547 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 MAFFQ9ULX9 164 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 SNX8Q9Y5X2 465 aa16.44■□□□□ 0.22
SMARCA4-201ENST00000344626 CPED1A4D0V7 1026 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 LEFTY2O00292 366 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 IRAK1P51617 712 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 SEMG2Q02383 582 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 SOX4Q06945 474 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 SPIDRQ14159 915 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 PFKFB4Q16877 469 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 PAGE2Q7Z2X7 111 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 CEP19Q96LK0 163 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 CCT8L1PA6NM43 557 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 TNFRSF8P28908 595 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 SOX11P35716 441 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 SLC39A4Q6P5W5 647 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 TPRG1Q6ZUI0 275 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 AHI1Q8N157 1196 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 PYROXD2Q8N2H3 581 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 STX19Q8N4C7 294 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 FUT8Q9BYC5 575 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 FNIP2Q9P278 1114 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 ATP5F1P24539 256 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 NTSP30990 170 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 NME5P56597 212 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 SYPL2Q5VXT5 272 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 TMEM110Q86TL2 294 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 SELENOMQ8WWX9 145 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 NR1H4Q96RI1 486 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 TMEM209Q96SK2 561 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 OGDHLQ9ULD0 1010 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 KCNE2Q9Y6J6 123 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 COLEC10Q9Y6Z7 277 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 PIRO00625 290 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 PRMT5O14744 637 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 CHRNB2P17787 502 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 PSMC3P17980 439 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 GCKP35557 465 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 GBE1Q04446 702 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 IL27RAQ6UWB1 636 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 PGM2Q96G03 612 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 ELOVL2Q9NXB9 296 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 CD84Q9UIB8 345 aa16.43■□□□□ 0.22
SMARCA4-201ENST00000344626 ANXA6P08133 673 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 GNA13Q14344 377 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 FAM120BQ96EK7 910 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 ZNF599Q96NL3 588 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 NMUR1Q9HB89 426 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 WARS2Q9UGM6 360 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 CDV3Q9UKY7 258 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 IGKV6D-21A0A0A0MT36 114 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 RPSAP08865 295 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 UNGP13051 313 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 PSMA4P25789 261 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 RRM2P31350 389 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 LPAL2Q16609 132 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 CARD16Q5EG05 197 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 SYT12Q8IV01 421 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 PIGKQ92643 395 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 ALG3Q92685 438 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 TADA1Q96BN2 335 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 MRPL57Q9BQC6 102 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 OSBPL2Q9H1P3 480 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 SIX2Q9NPC8 291 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 RAB21Q9UL25 225 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 TMCC3Q9ULS5 477 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 MBLAC1A4D2B0 266 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 NBNO60934 754 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 ARRB1P49407 418 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 ITIH4Q14624 930 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms