RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TRIM11Q96F44 468 aa13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 COQ10AQ96MF6 247 aa13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 WDR92Q96MX6 357 aa13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 TMEM168Q9H0V1 697 aa13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 POLR1BQ9H9Y6 1135 aa13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 USP29Q9HBJ7 922 aa13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 FGF22Q9HCT0 170 aa13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 NT5MQ9NPB1 228 aa13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 KLQ9UEF7 1012 aa13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 IP6K2Q9UHH9 426 aa13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 LUC7L2Q9Y383 392 aaKnown RBP13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 COL27A1Q8IZC6 1860 aaPredicted RBP13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 IGSF10Q6WRI0 2623 aa13.41□□□□□ -0.26
NUDCD3-201ENST00000338427 TOR1BO14657 336 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 RRP8O43159 456 aaKnown RBP13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 HTRA2O43464 458 aaPredicted RBP13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 HTR1BP28222 390 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 LSSP48449 732 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 POLD2P49005 469 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 RENBPP51606 427 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 POLR2LP62875 67 aaKnown RBP13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 MTM1Q13496 603 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 KRT81Q14533 505 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 ZNF235Q14590 738 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 ACAP1Q15027 740 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 ELOCQ15369 112 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 CNGA3Q16281 694 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 ESRP1Q6NXG1 681 aaKnown RBP13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 Q6ZVL8 140 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 TAF8Q7Z7C8 310 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 B3GNT8Q7Z7M8 397 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 SDR16C5Q8N3Y7 309 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 CCDC74AQ96AQ1 378 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 ZNF599Q96NL3 588 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 NUDCD1Q96RS6 583 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 XPO4Q9C0E2 1151 aaKnown RBP13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 CYP4F12Q9HCS2 524 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 ASCL3Q9NQ33 180 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 ATXN7L1Q9ULK2 861 aaPredicted RBP13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 NENFQ9UMX5 172 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 PLEKHM1Q9Y4G2 1056 aa13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 BZW2Q9Y6E2 419 aaKnown RBP13.4□□□□□ -0.26
NUDCD3-201ENST00000338427 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 A0A1W2PQM1 296 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 CFAP69A5D8W1 941 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 MYO1FO00160 1098 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 ALPIP09923 528 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 LHCGRP22888 699 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 TRIM23P36406 574 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 ETV3P41162 512 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 RPIAP49247 311 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 BLKP51451 505 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 PDX1P52945 283 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 AP1S1P61966 158 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 TLE3Q04726 772 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 ITKQ08881 620 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 SLC10A2Q12908 348 aaPredicted RBP13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 MARC1Q5VT66 337 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 RBM44Q6ZP01 1051 aaKnown RBP13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 FSTL5Q8N475 847 aaPredicted RBP13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 NIPA2Q8N8Q9 360 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 FAM46DQ8NEK8 389 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 OR56A4Q8NGH8 313 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 TEKT4Q8WW24 435 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 PIH1D2Q8WWB5 315 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 GLMNQ92990 594 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 HIC2Q96JB3 615 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 TBATAQ96M53 351 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 FOXP3Q9BZS1 431 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 CPNE5Q9HCH3 593 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 SPATS2LQ9NUQ6 558 aaKnown RBP13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 EVA1BQ9NVM1 165 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 CD84Q9UIB8 345 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 ST14Q9Y5Y6 855 aa13.39□□□□□ -0.27
NUDCD3-201ENST00000338427 SMG1Q96Q15 3661 aaKnown RBP13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 ATRXP46100 2492 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 NPIPB15A6NHN6 443 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 GOLGA6L19H0YKK7 550 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 CACNB4O00305 520 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 NTN3O00634 580 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 MFSD11O43934 449 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 NOBOXO60393 691 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 HEXIM1O94992 359 aaKnown RBP13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 CPP00450 1065 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 VIPR1P32241 457 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 MMP13P45452 471 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 ZNF135P52742 658 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 TPM4P67936 248 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 CXADRP78310 365 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 DSC2Q02487 901 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 DPYSL3Q14195 570 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 ZSCAN23Q3MJ62 389 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 GKN2Q86XP6 184 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 NRROSQ86YC3 692 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 ATPAF2Q8N5M1 289 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 GPR156Q8NFN8 814 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 ZNF564Q8TBZ8 553 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 FAM71BQ8TC56 605 aa13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 SCG3Q8WXD2 468 aaKnown RBP13.38□□□□□ -0.27
NUDCD3-201ENST00000338427 ZNF578Q96N58 590 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms