RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 CCDC38Q502W7 563 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 DNAJC21Q5F1R6 531 aaKnown RBP13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 TSSK4Q6SA08 328 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 CCNI2Q6ZMN8 369 aaPredicted RBP13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 DPPA4Q7L190 304 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 LYSMD3Q7Z3D4 306 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 AGGF1Q8N302 714 aaeCLIP13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 MPP5Q8N3R9 675 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 EIF1ADQ8N9N8 165 aaKnown RBP13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 MYRIPQ8NFW9 859 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 SIGLEC10Q96LC7 697 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 PARD6BQ9BYG5 372 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 GPR63Q9BZJ6 419 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 FOXP3Q9BZS1 431 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 ZFYVE1Q9HBF4 777 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 C11orf16Q9NQ32 467 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 SYBUQ9NX95 663 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.75□□□□□ -0.219e-23■■■□□ 19.1
TUBA1B-202ENST00000336023 CYP8B1Q9UNU6 501 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 ZNF711Q9Y462 761 aa13.75□□□□□ -0.21
TUBA1B-202ENST00000336023 E7ESA3 106 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 TSPAN6O43657 245 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 CLDN7O95471 211 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 MYBL2P10244 700 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 ADRA1DP25100 572 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 ACSL1P33121 698 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 DMWDQ09019 674 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 RALGDSQ12967 914 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 PDIA2Q13087 525 aaKnown RBP13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 SEPT6Q14141 434 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 ARHGEF7Q14155 803 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 TAF1AQ15573 450 aaPredicted RBP13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 CNGA3Q16281 694 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 PCID2Q5JVF3 399 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 LRRC66Q68CR7 880 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 WDR93Q6P2C0 686 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 CASC4Q6P4E1 433 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 CENPUQ71F23 418 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 GLT6D1Q7Z4J2 308 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 CCDC25Q86WR0 208 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 MAML2Q8IZL2 1156 aaPredicted RBP13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 RLN3Q8WXF3 142 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 WRAP53Q9BUR4 548 aaKnown RBP13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 BTBD1Q9H0C5 482 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 SGK2Q9HBY8 427 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 ARL5AQ9Y689 179 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 MAD1L1Q9Y6D9 718 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 ANKRD36A6QL64 1941 aa13.74□□□□□ -0.21
TUBA1B-202ENST00000336023 HEATR9A2RTY3 570 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 FAM47DPA6NHR8 397 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 C2orf81A6NN90 581 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 EIF3HO15372 352 aaKnown RBP eCLIP13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 LDB2O43679 373 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 PCDH8O95206 1070 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 SLC34A2O95436 690 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 CRTAMO95727 393 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 SLC4A1P02730 911 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 TDGF1P13385 188 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 ZNF30P17039 623 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 OXTRP30559 389 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 LIG3P49916 1009 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 PTSQ03393 145 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 CBLBQ13191 982 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 MAP7D1Q3KQU3 841 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 TMEM52BQ4KMG9 183 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 HP1BP3Q5SSJ5 553 aaPredicted RBP13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 LIPIQ6XZB0 460 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 TMC3Q7Z5M5 1100 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 IGDCC3Q8IVU1 814 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 GSPT2Q8IYD1 628 aaKnown RBP13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 TTC30BQ8N4P2 665 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 PPHLN1Q8NEY8 458 aaKnown RBP13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 EID2BQ96D98 161 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 TOE1Q96GM8 510 aaKnown RBP13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 RANBP9Q96S59 729 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 TSPYL1Q9H0U9 437 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 KDM4CQ9H3R0 1056 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 SAYSD1Q9NPB0 183 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 CHRAC1Q9NRG0 131 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 TCAF1Q9Y4C2 921 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 KCTD3Q9Y597 815 aa13.73□□□□□ -0.21
TUBA1B-202ENST00000336023 TBC1D3DA0A087WVF3 549 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 TBC1D3IA0A087WXS9 549 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 TBC1D3EA0A087X179 549 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 TBC1D3KA0A087X1G2 549 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 CCDC163A0A0D9SF12 145 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 MAGEB16A2A368 324 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 TBC1D3FA6NER0 549 aaPredicted RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 PRR23AA6NEV1 266 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 MROH6A6NGR9 719 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 TBC1D3LB9A6J9 549 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 H0Y858 1186 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 CTIFO43310 598 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 BUD23O43709 281 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 MMP20O60882 483 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 TUBBP07437 444 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 ELFN1P0C7U0 828 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 TBC1D3HP0C7X1 549 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 MCM3P25205 808 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 CD6P30203 668 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms