RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 PCDH12Q9NPG4 1184 aa24.39■■□□□ 1.5
SOX1-201ENST00000330949 NSMCE4AQ9NXX6 385 aa24.39■■□□□ 1.5
SOX1-201ENST00000330949 TMA7Q9Y2S6 64 aaKnown RBP24.39■■□□□ 1.5
SOX1-201ENST00000330949 TESMINQ9Y4I5 508 aa24.39■■□□□ 1.5
SOX1-201ENST00000330949 TMEM132BQ14DG7 1078 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 PAGE2BQ5JRK9 111 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 TAS2R42Q7RTR8 314 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 LRRC49Q8IUZ0 686 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 PEX5LQ8IYB4 626 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 CLIP4Q8N3C7 705 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 MINDY1Q8N5J2 469 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 OR7A2PQ8NGA2 310 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 CLIP3Q96DZ5 547 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 DGCR6LQ9BY27 220 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 CEP41Q9BYV8 373 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 MUC13Q9H3R2 512 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 RHOJQ9H4E5 214 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 GTF2IRD1Q9UHL9 959 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 CENPFP49454 3210 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 M0R3G1 203 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 ENO2P09104 434 aaPredicted RBP24.39■■□□□ 1.49
SOX1-201ENST00000330949 HNRNPLP14866 589 aaKnown RBP eCLIP24.39■■□□□ 1.49
SOX1-201ENST00000330949 NR4A2P43354 598 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 CLCQ05315 142 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 MAPK11Q15759 364 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 SPATS1Q496A3 300 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 TSTD2Q5T7W7 516 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 TAF2Q6P1X5 1199 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 GALNT13Q8IUC8 556 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 LACC1Q8IV20 430 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 OSCP1Q8WVF1 389 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 HDAC2Q92769 488 aaKnown RBP24.39■■□□□ 1.49
SOX1-201ENST00000330949 MUL1Q969V5 352 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 ZBED3Q96IU2 234 aaPredicted RBP24.39■■□□□ 1.49
SOX1-201ENST00000330949 MRM3Q9HC36 420 aaKnown RBP24.39■■□□□ 1.49
SOX1-201ENST00000330949 SEPT10Q9P0V9 454 aa24.39■■□□□ 1.49
SOX1-201ENST00000330949 CPSF3Q9UKF6 684 aaKnown RBP24.39■■□□□ 1.49
SOX1-201ENST00000330949 INPP4BO15327 924 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 NKX2-5P52952 324 aaPredicted RBP24.38■■□□□ 1.49
SOX1-201ENST00000330949 DNAJB13P59910 316 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 RETREG3Q86VR2 466 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 ZC3HC1Q86WB0 502 aaKnown RBP24.38■■□□□ 1.49
SOX1-201ENST00000330949 DCP2Q8IU60 420 aaKnown RBP24.38■■□□□ 1.49
SOX1-201ENST00000330949 DNAAF3Q8N9W5 541 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 POMKQ9H5K3 350 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 IL1RL2Q9HB29 575 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 NDUFAF1Q9Y375 327 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 SNPHO15079 494 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 CHRNB1P11230 501 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 AVPR1AP37288 418 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 GLUD2P49448 558 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 GABARAPL2P60520 117 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 ABHD15Q6UXT9 468 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 BDH2Q9BUT1 245 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 MARCH7Q9H992 704 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 POLE4Q9NR33 117 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 ANAPC2Q9UJX6 822 aa24.38■■□□□ 1.49
SOX1-201ENST00000330949 FAM172BPA6NC97 362 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 DYRK3O43781 588 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 UMPSP11172 480 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 ARSAP15289 507 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 SHMT2P34897 504 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 IGBP1P78318 339 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 FKBP1CQ5VVH2 108 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 XRRA1Q6P2D8 792 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 PAPD5Q8NDF8 572 aaKnown RBP24.37■■□□□ 1.49
SOX1-201ENST00000330949 OR6Q1Q8NGQ2 317 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 OMDQ99983 421 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 MRPL4Q9BYD3 311 aaKnown RBP24.37■■□□□ 1.49
SOX1-201ENST00000330949 NEK6Q9HC98 313 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 ISPDA4D126 451 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 KMOO15229 486 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 IL12RB2Q99665 862 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 OSBPL2Q9H1P3 480 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 SPC25Q9HBM1 224 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 ZNF302Q9NR11 478 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.37■■□□□ 1.49
SOX1-201ENST00000330949 MFHAS1Q9Y4C4 1052 aa24.37■■□□□ 1.49
SOX1-201ENST00000330949 ZFC3H1O60293 1989 aaKnown RBP24.37■■□□□ 1.49
SOX1-201ENST00000330949 RFPL2O75678 378 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 NADKO95544 446 aaPredicted RBP24.36■■□□□ 1.49
SOX1-201ENST00000330949 GSNP06396 782 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 LAMC2Q13753 1193 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 RNF19BQ6ZMZ0 732 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 SLC26A9Q7LBE3 791 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 FUNDC1Q8IVP5 155 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 C8orf59Q8N0T1 100 aaPredicted RBP24.36■■□□□ 1.49
SOX1-201ENST00000330949 ZNF567Q8N184 647 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 TXNDC5Q8NBS9 432 aaKnown RBP24.36■■□□□ 1.49
SOX1-201ENST00000330949 KCTD15Q96SI1 283 aaPredicted RBP24.36■■□□□ 1.49
SOX1-201ENST00000330949 C17orf80Q9BSJ5 609 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 SNX5Q9Y5X3 404 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 XYLBO75191 536 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 ATP5F1P24539 256 aaPredicted RBP24.36■■□□□ 1.49
SOX1-201ENST00000330949 MZF1P28698 734 aaPredicted RBP24.36■■□□□ 1.49
SOX1-201ENST00000330949 HIST2H2ACQ16777 129 aaPredicted RBP24.36■■□□□ 1.49
SOX1-201ENST00000330949 ADCK1Q86TW2 530 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 LRCH3Q96II8 777 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 CHRAC1Q9NRG0 131 aa24.36■■□□□ 1.49
SOX1-201ENST00000330949 MAP10Q9P2G4 905 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms