RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ARRDC3Q96B67 414 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 ERLEC1Q96DZ1 483 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 FEM1CQ96JP0 617 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 ZNF599Q96NL3 588 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 NRSN2Q9GZP1 204 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 NOL6Q9H6R4 1146 aaKnown RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 LRRC19Q9H756 370 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 EBF2Q9HAK2 575 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 CYP4F12Q9HCS2 524 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 RCOR3Q9P2K3 495 aaPredicted RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 AP4E1Q9UPM8 1137 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 LUC7L2Q9Y383 392 aaKnown RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 SNX11Q9Y5W9 270 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 SNX10Q9Y5X0 201 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 USP34Q70CQ2 3546 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 CEP250Q9BV73 2442 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 TMEM131Q92545 1883 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 A0A1W2PQ67 120 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 SSU72P8A0A1W2PR75 194 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 CFAP69A5D8W1 941 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 RASA4BC9J798 803 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 H0Y8X5 98 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 K7ERQ8 282 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 AREL1O15033 823 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 RASA4O43374 803 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 CBFA2T2O43439 604 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 SH3BP5O60239 455 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 PRPSAP2O60256 369 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 PRAMEF11O60813 436 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 IGSF6O95976 241 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 WNT1P04628 370 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 CYP1A2P05177 515 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 PROS1P07225 676 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 ESRRAP11474 423 aaPredicted RBP6.41□□□□□ -1.38
SMG1-201ENST00000330588 GLDCP23378 1020 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 PSMA2P25787 234 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 EPHA8P29322 1005 aaPredicted RBP6.41□□□□□ -1.38
SMG1-201ENST00000330588 HSPA9P38646 679 aaKnown RBP6.41□□□□□ -1.38
SMG1-201ENST00000330588 PPP2CBP62714 309 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 PPP2CAP67775 309 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 OGDHQ02218 1023 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 NSUN2Q08J23 767 aaKnown RBP eCLIP6.41□□□□□ -1.38
SMG1-201ENST00000330588 ILKQ13418 452 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 STAT4Q14765 748 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 DPYSL2Q16555 572 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 ZNF284Q2VY69 593 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 ZSCAN23Q3MJ62 389 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 RAB6CQ53S08 254 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 RALGPS1Q5JS13 557 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 EXOSC6Q5RKV6 272 aaKnown RBP6.41□□□□□ -1.38
SMG1-201ENST00000330588 LINGO4Q6UY18 593 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 KYAT3Q6YP21 454 aaKnown RBP6.41□□□□□ -1.38
SMG1-201ENST00000330588 CYP4V2Q6ZWL3 525 aaPredicted RBP6.41□□□□□ -1.38
SMG1-201ENST00000330588 VSIG1Q86XK7 387 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 DNAAF5Q86Y56 855 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 SHISA5Q8N114 240 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 ARFGAP1Q8N6T3 406 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 FAM71BQ8TC56 605 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 SAP25Q8TEE9 199 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 GATA6Q92908 595 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 VOPP1Q96AW1 172 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 ZNF653Q96CK0 615 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 ZNF641Q96N77 438 aaPredicted RBP6.41□□□□□ -1.38
SMG1-201ENST00000330588 SLC6A18Q96N87 628 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 DNAJC7Q99615 494 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 SPON2Q9BUD6 331 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 SNRNP25Q9BV90 132 aaKnown RBP6.41□□□□□ -1.38
SMG1-201ENST00000330588 RAB6CQ9H0N0 254 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 ZWILCHQ9H900 591 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 PDFQ9HBH1 243 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 USP29Q9HBJ7 922 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 FSCN3Q9NQT6 498 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 AASDHPPTQ9NRN7 309 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 KCTD5Q9NXV2 234 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 TAS2R14Q9NYV8 317 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 DKK4Q9UBT3 224 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 CNOT8Q9UFF9 292 aaKnown RBP6.41□□□□□ -1.38
SMG1-201ENST00000330588 NENFQ9UMX5 172 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 FADS3Q9Y5Q0 445 aa6.41□□□□□ -1.38
SMG1-201ENST00000330588 FAM47DPA6NHR8 397 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 A6NNZ2 444 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 ZNF487B1APH4 448 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 EEF2KO00418 725 aaKnown RBP6.4□□□□□ -1.38
SMG1-201ENST00000330588 LRCH4O75427 683 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 TMCC1O94876 653 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 GJB6O95452 261 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 GYPCP04921 128 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 FTH1P19P0C7X4 201 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 MIPP30301 263 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 SERPINB6P35237 376 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 ACVRL1P37023 503 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 RABIFP47224 123 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 ST13P50502 369 aaKnown RBP6.4□□□□□ -1.38
SMG1-201ENST00000330588 RENBPP51606 427 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 METAP1P53582 386 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 IL10RBQ08334 325 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 ELP6Q0PNE2 266 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 DPYSQ14117 519 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 MYLK3Q32MK0 819 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 TDRD12Q587J7 1177 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms