RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 KIAA1024LP59773 190 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 ERVPABLB-1P60509 514 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 IFI16Q16666 785 aaKnown RBP12.73□□□□□ -0.37
CKS2-201ENST00000314355 ISXQ2M1V0 245 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 ALG11Q2TAA5 492 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 TBC1D25Q3MII6 688 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 TPRG1LQ5T0D9 272 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 PNCKQ6P2M8 343 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 ARL14Q8N4G2 192 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 FAM46DQ8NEK8 389 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 NUS1Q96E22 293 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 BTBD6Q96KE9 485 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 STRADBQ9C0K7 418 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 TCEAL2Q9H3H9 227 aaPredicted RBP12.73□□□□□ -0.37
CKS2-201ENST00000314355 GOLGA6AQ9NYA3 693 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 DNPEPQ9ULA0 475 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 DGKBQ9Y6T7 804 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 PSMD11O00231 422 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 MPOP05164 745 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 PYGLP06737 847 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 TGM2P21980 687 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 ZSCAN23Q3MJ62 389 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 SPECC1LQ69YQ0 1117 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 FOXR1Q6PIV2 292 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 CRTC1Q6UUV9 634 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 CYP4V2Q6ZWL3 525 aaPredicted RBP12.72□□□□□ -0.37
CKS2-201ENST00000314355 ZSWIM9Q86XI8 627 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 SLC35F3Q8IY50 421 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 SNIP1Q8TAD8 396 aaKnown RBP12.72□□□□□ -0.37
CKS2-201ENST00000314355 KIAA1524Q8TCG1 905 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.72□□□□□ -0.37
CKS2-201ENST00000314355 VOPP1Q96AW1 172 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 SCRN2Q96FV2 425 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 CCDC42Q96M95 316 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 CCDC3Q9BQI4 270 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 MGME1Q9BQP7 344 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 XPO4Q9C0E2 1151 aaKnown RBP12.72□□□□□ -0.37
CKS2-201ENST00000314355 CLPBQ9H078 707 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 DPEP2Q9H4A9 486 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 NOD2Q9HC29 1040 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 CYP4F12Q9HCS2 524 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 NT5MQ9NPB1 228 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 ETNK2Q9NVF9 386 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.72□□□□□ -0.37
CKS2-201ENST00000314355 SIRPGQ9P1W8 387 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 B4GALT6Q9UBX8 382 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 AMACRQ9UHK6 382 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 TTLL3Q9Y4R7 772 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 PCDHB1Q9Y5F3 818 aa12.72□□□□□ -0.37
CKS2-201ENST00000314355 TTC24A2A3L6 582 aaPredicted RBP12.71□□□□□ -0.37
CKS2-201ENST00000314355 MATN3O15232 486 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 HTRA2O43464 458 aaPredicted RBP12.71□□□□□ -0.37
CKS2-201ENST00000314355 PROSCO94903 275 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 GYPCP04921 128 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 CCNCP24863 283 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 TRIM23P36406 574 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 UCNP55089 124 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 MAXP61244 160 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 SLC25A11Q02978 314 aaKnown RBP12.71□□□□□ -0.37
CKS2-201ENST00000314355 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 ILF3Q12906 894 aaKnown RBP eCLIP12.71□□□□□ -0.37
CKS2-201ENST00000314355 SLC18A3Q16572 532 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 ANKRD20A8PQ5CZ79 823 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 C3orf38Q5JPI3 329 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 PLA2G15Q8NCC3 412 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 CCNYQ8ND76 341 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 WDR36Q8NI36 951 aaKnown RBP12.71□□□□□ -0.37
CKS2-201ENST00000314355 PCDH19Q8TAB3 1148 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 SPOCK2Q92563 424 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 FUBP1Q96AE4 644 aaKnown RBP12.71□□□□□ -0.37
CKS2-201ENST00000314355 GFM1Q96RP9 751 aaKnown RBP12.71□□□□□ -0.37
CKS2-201ENST00000314355 RBM15Q96T37 977 aaKnown RBP eCLIP12.71□□□□□ -0.372e-8■■■□□ 17.5
CKS2-201ENST00000314355 SEMA3CQ99985 751 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 ZNF670Q9BS34 389 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 GSDMCQ9BYG8 508 aa12.71□□□□□ -0.37
CKS2-201ENST00000314355 RBM22Q9NW64 420 aaKnown RBP eCLIP12.71□□□□□ -0.37
CKS2-201ENST00000314355 AKAP7Q9P0M2 348 aaPredicted RBP12.71□□□□□ -0.37
CKS2-201ENST00000314355 FAM208BQ5VWN6 2430 aa12.71□□□□□ -0.38
CKS2-201ENST00000314355 LY6G6EA0A0G2JKS1 128 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 SSU72P8A0A1W2PR75 194 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 TLX3O43711 291 aaPredicted RBP12.7□□□□□ -0.38
CKS2-201ENST00000314355 HEXIM1O94992 359 aaKnown RBP12.7□□□□□ -0.38
CKS2-201ENST00000314355 PGLSO95336 258 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 MYCLP1P12525 358 aaPredicted RBP12.7□□□□□ -0.38
CKS2-201ENST00000314355 TCF4P15884 667 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 GLB1P16278 677 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 CR2P20023 1033 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 HNRNPH3P31942 346 aaKnown RBP12.7□□□□□ -0.38
CKS2-201ENST00000314355 GARSP41250 739 aaKnown RBP12.7□□□□□ -0.38
CKS2-201ENST00000314355 GPR1P46091 355 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 RALGDSQ12967 914 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 EIF3IQ13347 325 aaKnown RBP12.7□□□□□ -0.38
CKS2-201ENST00000314355 PAFAH1B3Q15102 231 aaKnown RBP12.7□□□□□ -0.38
CKS2-201ENST00000314355 TCEA2Q15560 299 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 PERM1Q5SV97 790 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 RAET1GQ6H3X3 334 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 TP53INP2Q8IXH6 220 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 KCNE4Q8WWG9 221 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 TMEM74Q96NL1 305 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms