RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 NLE1Q9NVX2 485 aaPredicted RBP5.8□□□□□ -1.48
TTC39C-201ENST00000304621 POLR3BQ9NW08 1133 aaPredicted RBP5.8□□□□□ -1.48
TTC39C-201ENST00000304621 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.8□□□□□ -1.48
TTC39C-201ENST00000304621 ACTL7BQ9Y614 415 aa5.8□□□□□ -1.48
TTC39C-201ENST00000304621 NUMBLQ9Y6R0 609 aa5.8□□□□□ -1.48
TTC39C-201ENST00000304621 WASF2Q9Y6W5 498 aa5.8□□□□□ -1.48
TTC39C-201ENST00000304621 SCN8AQ9UQD0 1980 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 CXorf51AA0A1B0GTR3 108 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 PRPF4O43172 522 aaKnown RBP eCLIP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 HAUS5O94927 633 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 PAPSS2O95340 614 aaPredicted RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 GOT2P00505 430 aaKnown RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 MT-ND3P03897 115 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 PSMC3P17980 439 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 PSMA3P25788 255 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 ATP5DP30049 168 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 FOXN2P32314 431 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 LSP1P33241 339 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 HNF1BP35680 557 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 GP5P40197 560 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 CSRP3P50461 194 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 LIMK2P53671 638 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 SEC24CP53992 1094 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 IRF9Q00978 393 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 BCL2L1Q07817 233 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 NR1H3Q13133 447 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 NAB1Q13506 487 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 HTR4Q13639 388 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 PDGFRLQ15198 375 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 TAF1AQ15573 450 aaPredicted RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 CCDC85BQ15834 202 aaPredicted RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 POM121L1PQ3SYA9 428 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 RALGPS1Q5JS13 557 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 RBM20Q5T481 1227 aaKnown RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 ARMC12Q5T9G4 340 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 ZNF470Q6ECI4 717 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 GRAMD4Q6IC98 578 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 FSTL4Q6MZW2 842 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 NEPROQ6NW34 567 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 TIFABQ6ZNK6 161 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 RFLNAQ6ZTI6 216 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 TAOK1Q7L7X3 1001 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 GLT6D1Q7Z4J2 308 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 ZC3HC1Q86WB0 502 aaKnown RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 PCDH20Q8N6Y1 951 aaKnown RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 GRIN3AQ8TCU5 1115 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 CDKL2Q92772 493 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 EZH1Q92800 747 aaPredicted RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 PTPRN2Q92932 1015 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 ECHDC3Q96DC8 303 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 CCDC97Q96F63 343 aaPredicted RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 VPS39Q96JC1 886 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 RIPOR3Q96MK2 946 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 ACOX2Q99424 681 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 CEP44Q9C0F1 390 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 PCMTD2Q9NV79 361 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 THG1LQ9NWX6 298 aaKnown RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 ELOVL2Q9NXB9 296 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 ZNF711Q9Y462 761 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 IKBKGQ9Y6K9 419 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 BPTFQ12830 3046 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 C5orf42Q9H799 3197 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 TICRRQ7Z2Z1 1910 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 A0A0J9YYE9 177 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 NPIPB15A6NHN6 443 aaPredicted RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 FAM47DPA6NHR8 397 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 C2CD4DB7Z1M9 353 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 WASH3PC4AMC7 463 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 ANHXE9PGG2 379 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 GAPDHSO14556 408 aaPredicted RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 LEFTY1O75610 366 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 RPP40O75818 363 aaKnown RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 KRT37O76014 449 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 CLDN7O95471 211 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 TRBC1P01850 177 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 UGT2B4P06133 528 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 DLDP09622 509 aaKnown RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 MTHFRP42898 656 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 MAGEA12P43365 314 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 SERPINB9P50453 376 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 SNRPD1P62314 119 aaKnown RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 SULT2A1Q06520 285 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 GABPB1Q06547 395 aaPredicted RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 DMTNQ08495 405 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 PEX6Q13608 980 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 PDE1CQ14123 709 aaPredicted RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 ZNF460Q14592 562 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 GRTP1Q5TC63 336 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 Q7L0L9 218 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 SLC41A1Q8IVJ1 513 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 PLD6Q8N2A8 252 aaKnown RBP5.79□□□□□ -1.48
TTC39C-201ENST00000304621 ARFGAP2Q8N6H7 521 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 TCP10LQ8TDR4 215 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 WFIKKN2Q8TEU8 576 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 STYXQ8WUJ0 223 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 CDKN2AIPNLQ96HQ2 116 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 APOPT1Q96IL0 206 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 KLHL32Q96NJ5 620 aa5.79□□□□□ -1.48
TTC39C-201ENST00000304621 SMC6Q96SB8 1091 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms