RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 RAD51Q06609 339 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 TSNAXIP1Q2TAA8 658 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 RBM20Q5T481 1227 aaKnown RBP14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 LCA5Q86VQ0 697 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 C12orf76Q8N812 135 aaPredicted RBP14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 SPHK2Q9NRA0 654 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 NLE1Q9NVX2 485 aaPredicted RBP14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 WNT6Q9Y6F9 365 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 DNAJC6O75061 913 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 MOSPD3O75425 235 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 TYRP14679 529 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 CEBPBP17676 345 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 NRIP1P48552 1158 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 ILF2Q12905 390 aaKnown RBP14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 CSHL1Q14406 222 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 PCLAFQ15004 111 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 FAM83EQ2M2I3 478 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 ZNF789Q5FWF6 425 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 LY6G5CQ5SRR4 150 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 C7orf26Q96N11 449 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 UNKQ9C0B0 810 aaKnown RBP14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 LINC00597Q9H2U6 94 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 BPIFA1Q9NP55 256 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 MARCH4Q9P2E8 410 aaPredicted RBP14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 RIMKLBQ9ULI2 386 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 VWA7Q9Y334 891 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 MYO1CO00159 1063 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 PRLP01236 227 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 SLC35E2BP0CK96 405 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 SERPINA4P29622 427 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 RECQLP46063 649 aaPredicted RBP14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 SLC1A6P48664 564 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 ZRANB3Q5FWF4 1079 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 HECTD2Q5U5R9 776 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 WDR75Q8IWA0 830 aaKnown RBP14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 NAT16Q8N8M0 369 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 PNPLA1Q8N8W4 532 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 ZNF398Q8TD17 642 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 OMDQ99983 421 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 MYOFQ9NZM1 2061 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 SOBPA7XYQ1 873 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 TGDSO95455 350 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 PABPC1P11940 636 aaKnown RBP14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 WEE1P30291 646 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 HLA-FP30511 346 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 NNMTP40261 264 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 STK19P49842 368 aaPredicted RBP14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 ERVK-21P61565 698 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 CEP97Q8IW35 865 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 MICALL1Q8N3F8 863 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 SPATA6LQ8N4H0 392 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 MDGA1Q8NFP4 955 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 RFWD2Q8NHY2 731 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 NSMCE3Q96MG7 304 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 SMIM14Q96QK8 99 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 MCMBPQ9BTE3 642 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 UBOX5O94941 541 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 PIGNO95427 931 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 HSPA4LO95757 839 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 AGAP9Q5VTM2 703 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 FAM45BPQ6NSW5 357 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 TAS2R42Q7RTR8 314 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 C10orf67Q8IYJ2 551 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 OR2AP1Q8NGE2 309 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 FAM45AQ8TCE6 357 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 C10orf82Q8WW14 230 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 NXNL1Q96CM4 212 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 ERP27Q96DN0 273 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 TRIM13O60858 407 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 S1PR4O95977 384 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 OGNP20774 298 aaKnown RBP14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 MAGEA10P43363 369 aaPredicted RBP14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 GRIA4P48058 902 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 ACVR1Q04771 509 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 PPP2R2DQ66LE6 453 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 LRRC8EQ6NSJ5 796 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 ADGRD2Q7Z7M1 963 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 CLEC14AQ86T13 490 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 OTUB2Q96DC9 234 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 ZSWIM3Q96MP5 696 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 TMEM120AQ9BXJ8 343 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 POLR3BQ9NW08 1133 aaPredicted RBP14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 MSRAQ9UJ68 235 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 INTS6Q9UL03 887 aaKnown RBP14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 SLC8A2Q9UPR5 921 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 SLC30A1Q9Y6M5 507 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 CAPN7Q9Y6W3 813 aa14.53□□□□□ -0.08
SHCBP1-201ENST00000303383 TK2O00142 265 aa14.52□□□□□ -0.08
SHCBP1-201ENST00000303383 KLHL2O95198 593 aa14.52□□□□□ -0.08
SHCBP1-201ENST00000303383 GKP32189 559 aa14.52□□□□□ -0.08
SHCBP1-201ENST00000303383 CTSOP43234 321 aaPredicted RBP14.52□□□□□ -0.08
SHCBP1-201ENST00000303383 ZNF140P52738 457 aaPredicted RBP14.52□□□□□ -0.08
SHCBP1-201ENST00000303383 SULT2A1Q06520 285 aa14.52□□□□□ -0.08
SHCBP1-201ENST00000303383 ASPHQ12797 758 aa14.52□□□□□ -0.08
SHCBP1-201ENST00000303383 MBLAC2Q68D91 279 aa14.52□□□□□ -0.08
SHCBP1-201ENST00000303383 PPP2R3CQ969Q6 453 aa14.52□□□□□ -0.08
SHCBP1-201ENST00000303383 RILPQ96NA2 401 aa14.52□□□□□ -0.08
SHCBP1-201ENST00000303383 IGFLR1Q9H665 355 aa14.52□□□□□ -0.08
SHCBP1-201ENST00000303383 FKBPLQ9UIM3 349 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms