RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 HS3ST2Q9Y278 367 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 VWA7Q9Y334 891 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 CCDC195A0A1B0GUA6 201 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 PFDN6O15212 129 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 ARHGEF15O94989 841 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 MT-CO1P00395 513 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 MYL2P10916 166 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 SAT1P21673 171 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 CD70P32970 193 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 SUOXP51687 545 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 ASPHQ12797 758 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 GPM6BQ13491 265 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 FAM83EQ2M2I3 478 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 SPRED3Q2MJR0 410 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 ZNF789Q5FWF6 425 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 PITRM1Q5JRX3 1037 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 AGAP9Q5VTM2 703 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 FAM91A1Q658Y4 838 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 LRRC8EQ6NSJ5 796 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 RNF135Q8IUD6 432 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 ARID3BQ8IVW6 561 aaPredicted RBP10.62□□□□□ -0.71
CLP1-201ENST00000302731 TNS4Q8IZW8 715 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 FSTL5Q8N475 847 aaPredicted RBP10.62□□□□□ -0.71
CLP1-201ENST00000302731 TTC30BQ8N4P2 665 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 OR4K2Q8NGD2 314 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 PIWIL2Q8TC59 973 aaKnown RBP10.62□□□□□ -0.71
CLP1-201ENST00000302731 KCTD4Q8WVF5 259 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 PPM1EQ8WY54 764 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 IRF7Q92985 503 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 ZNF707Q96C28 371 aaPredicted RBP10.62□□□□□ -0.71
CLP1-201ENST00000302731 UBXN10Q96LJ8 280 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 TUBGCP5Q96RT8 1024 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 SLC2A11Q9BYW1 496 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 LMAN2LQ9H0V9 348 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 SMG9Q9H0W8 520 aaKnown RBP10.62□□□□□ -0.71
CLP1-201ENST00000302731 MRPL46Q9H2W6 279 aaKnown RBP10.62□□□□□ -0.71
CLP1-201ENST00000302731 PLK2Q9NYY3 685 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 MARCH4Q9P2E8 410 aaPredicted RBP10.62□□□□□ -0.71
CLP1-201ENST00000302731 DCTN4Q9UJW0 460 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 CLEC4EQ9ULY5 219 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 HCFC2Q9Y5Z7 792 aa10.62□□□□□ -0.71
CLP1-201ENST00000302731 NOTCH4Q99466 2003 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 A0A0G2JND7 137 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 OR51F1A6NGY5 319 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 K7ERQ8 282 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 TRAFD1O14545 582 aaPredicted RBP10.61□□□□□ -0.71
CLP1-201ENST00000302731 STX7O15400 261 aaKnown RBP10.61□□□□□ -0.71
CLP1-201ENST00000302731 ZNF821O75541 412 aaPredicted RBP10.61□□□□□ -0.71
CLP1-201ENST00000302731 CA3P07451 260 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 RBP1P09455 135 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 SBK3P0C264 359 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 PIRTP0C851 137 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 CD9P21926 228 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 HLA-FP30511 346 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 HMGCLP35914 325 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 HK2P52789 917 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 EPHB1P54762 984 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 ABCE1P61221 599 aaKnown RBP10.61□□□□□ -0.71
CLP1-201ENST00000302731 SNRPD1P62314 119 aaKnown RBP10.61□□□□□ -0.71
CLP1-201ENST00000302731 BCL2L1Q07817 233 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 ITGA9Q13797 1035 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 AARS2Q5JTZ9 985 aaKnown RBP10.61□□□□□ -0.71
CLP1-201ENST00000302731 RBM20Q5T481 1227 aaKnown RBP10.61□□□□□ -0.71
CLP1-201ENST00000302731 LIPMQ5VYY2 423 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 KLC3Q6P597 504 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 ZCCHC23Q6ZST2 131 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 PLPP6Q8IY26 295 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLP1-201ENST00000302731 TTC16Q8NEE8 873 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 OR2AP1Q8NGE2 309 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 RIN3Q8TB24 985 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 PIH1D2Q8WWB5 315 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 BHMTQ93088 406 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 ERP27Q96DN0 273 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 CCDC126Q96EE4 140 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 THOC1Q96FV9 657 aaKnown RBP10.61□□□□□ -0.71
CLP1-201ENST00000302731 MYO19Q96H55 970 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 SORT1Q99523 831 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 OLFM1Q99784 485 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 TUBB6Q9BUF5 446 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 TMEM120AQ9BXJ8 343 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 C20orf27Q9GZN8 174 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 ZMYND15Q9H091 742 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 WWP1Q9H0M0 922 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 MYLK2Q9H1R3 596 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 ATP13A3Q9H7F0 1226 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 SUDS3Q9H7L9 328 aaPredicted RBP10.61□□□□□ -0.71
CLP1-201ENST00000302731 SAR1AQ9NR31 198 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 SPHK2Q9NRA0 654 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 TXLNGQ9NUQ3 528 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 PCDHB9Q9Y5E1 797 aa10.61□□□□□ -0.71
CLP1-201ENST00000302731 ANKRD36A6QL64 1941 aa10.6□□□□□ -0.71
CLP1-201ENST00000302731 A0A1W2PQ67 120 aa10.6□□□□□ -0.71
CLP1-201ENST00000302731 CFAP73A6NFT4 308 aa10.6□□□□□ -0.71
CLP1-201ENST00000302731 CCL22O00626 93 aa10.6□□□□□ -0.71
CLP1-201ENST00000302731 SMAD6O43541 496 aaKnown RBP10.6□□□□□ -0.71
CLP1-201ENST00000302731 HNRNPCL1O60812 293 aaKnown RBP10.6□□□□□ -0.71
CLP1-201ENST00000302731 UNC5CO95185 931 aa10.6□□□□□ -0.71
CLP1-201ENST00000302731 CSPG5O95196 566 aa10.6□□□□□ -0.71
CLP1-201ENST00000302731 PRAMEF12O95522 483 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms