RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 IL10RBQ08334 325 aa22.02■■□□□ 1.11
TPM4-201ENST00000300933 PLD1Q13393 1074 aa22.02■■□□□ 1.11
TPM4-201ENST00000300933 MAP7Q14244 749 aa22.02■■□□□ 1.11
TPM4-201ENST00000300933 TCHHL1Q5QJ38 904 aaPredicted RBP22.02■■□□□ 1.11
TPM4-201ENST00000300933 NUF2Q9BZD4 464 aa22.02■■□□□ 1.11
TPM4-201ENST00000300933 CDH19Q9H159 772 aa22.02■■□□□ 1.11
TPM4-201ENST00000300933 NSMCE4AQ9NXX6 385 aa22.02■■□□□ 1.11
TPM4-201ENST00000300933 PRRC2BQ5JSZ5 2229 aaKnown RBP22.01■■□□□ 1.11
TPM4-201ENST00000300933 PRAMEP78395 509 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 TLE2Q04725 743 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 GRAMD1BQ3KR37 738 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 FBXL19Q6PCT2 694 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 ZYG11AQ6WRX3 759 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 TEX26Q8N6G2 289 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 ANKRD49Q8WVL7 239 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 ARNT2Q9HBZ2 717 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 ZNF840PA6NDX5 716 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 ZBTB14O43829 449 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 ACSL4O60488 711 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 HNRNPLP14866 589 aaKnown RBP eCLIP22.01■■□□□ 1.11
TPM4-201ENST00000300933 ARSAP15289 507 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 KCNA5P22460 613 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 ELAVL2Q12926 359 aaKnown RBP22.01■■□□□ 1.11
TPM4-201ENST00000300933 CCNIQ14094 377 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 MYBPC3Q14896 1274 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 USP41Q3LFD5 358 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 LINGO4Q6UY18 593 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 LRRC43Q8N309 656 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 MARK4Q96L34 752 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 PRICKLE1Q96MT3 831 aaPredicted RBP22.01■■□□□ 1.11
TPM4-201ENST00000300933 GCNAQ96QF7 691 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 C5orf42Q9H799 3197 aa22.01■■□□□ 1.11
TPM4-201ENST00000300933 PRAMEF11O60813 436 aa22■■□□□ 1.11
TPM4-201ENST00000300933 DBN1Q16643 649 aa22■■□□□ 1.11
TPM4-201ENST00000300933 TRIM60Q495X7 471 aa22■■□□□ 1.11
TPM4-201ENST00000300933 TMC7Q7Z402 723 aa22■■□□□ 1.11
TPM4-201ENST00000300933 LCA5Q86VQ0 697 aa22■■□□□ 1.11
TPM4-201ENST00000300933 STYXQ8WUJ0 223 aa22■■□□□ 1.11
TPM4-201ENST00000300933 RHBDL2Q9NX52 303 aa22■■□□□ 1.11
TPM4-201ENST00000300933 CHCHD3Q9NX63 227 aaKnown RBP22■■□□□ 1.11
TPM4-201ENST00000300933 CBX4O00257 560 aa22■■□□□ 1.11
TPM4-201ENST00000300933 LDB2O43679 373 aa22■■□□□ 1.11
TPM4-201ENST00000300933 ASLP04424 464 aa22■■□□□ 1.11
TPM4-201ENST00000300933 CCDC166P0CW27 439 aa22■■□□□ 1.11
TPM4-201ENST00000300933 CORO1AP31146 461 aaKnown RBP22■■□□□ 1.11
TPM4-201ENST00000300933 PARP15Q460N3 678 aa22■■□□□ 1.11
TPM4-201ENST00000300933 LIPMQ5VYY2 423 aa22■■□□□ 1.11
TPM4-201ENST00000300933 SDCCAG8Q86SQ7 713 aaPredicted RBP22■■□□□ 1.11
TPM4-201ENST00000300933 TRIM74Q86UV6 250 aa22■■□□□ 1.11
TPM4-201ENST00000300933 TRIM73Q86UV7 250 aa22■■□□□ 1.11
TPM4-201ENST00000300933 TXNDC5Q8NBS9 432 aaKnown RBP22■■□□□ 1.11
TPM4-201ENST00000300933 MRPL9Q9BYD2 267 aaKnown RBP22■■□□□ 1.11
TPM4-201ENST00000300933 POLR1EQ9GZS1 481 aaKnown RBP22■■□□□ 1.11
TPM4-201ENST00000300933 FNDC1Q4ZHG4 1894 aaPredicted RBP21.99■■□□□ 1.11
TPM4-201ENST00000300933 TARM1B6A8C7 271 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 RAG1P15918 1043 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 HMGA1P17096 107 aaKnown RBP21.99■■□□□ 1.11
TPM4-201ENST00000300933 HOXD9P28356 352 aaPredicted RBP21.99■■□□□ 1.11
TPM4-201ENST00000300933 CDKN2DP55273 166 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 GNA12Q03113 381 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 RING1Q06587 406 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 TAF12Q16514 161 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 TMEM198Q66K66 360 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 AAGABQ6PD74 315 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 PHF21BQ96EK2 531 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 CFHR5Q9BXR6 569 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 C1orf21Q9H246 121 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 VPS45Q9NRW7 570 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 DDX18Q9NVP1 670 aaKnown RBP21.99■■□□□ 1.11
TPM4-201ENST00000300933 ZDHHC7Q9NXF8 308 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 TSPAN8P19075 237 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 CDK18Q07002 472 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 SLC8B1Q6J4K2 584 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 CILP2Q8IUL8 1156 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 LSMEM2Q8N112 164 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 PTCD2Q8WV60 388 aaKnown RBP21.99■■□□□ 1.11
TPM4-201ENST00000300933 IGSF21Q96ID5 467 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 PRKD2Q9BZL6 878 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 ILKAPQ9H0C8 392 aaPredicted RBP21.99■■□□□ 1.11
TPM4-201ENST00000300933 CWH43Q9H720 699 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 MTRRQ9UBK8 725 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 ANKRD6Q9Y2G4 727 aa21.99■■□□□ 1.11
TPM4-201ENST00000300933 KIAA0100Q14667 2235 aaKnown RBP21.99■■□□□ 1.11
TPM4-201ENST00000300933 KLHL2O95198 593 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 CHN2P52757 468 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 HECTD3Q5T447 861 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 TMEM207Q6UWW9 146 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 HPS6Q86YV9 775 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 SLC22A12Q96S37 553 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 MRM3Q9HC36 420 aaKnown RBP21.98■■□□□ 1.11
TPM4-201ENST00000300933 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.98■■□□□ 1.112e-8■■■□□ 15
TPM4-201ENST00000300933 PACSIN3Q9UKS6 424 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 TMCO1Q9UM00 188 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 MYO7AQ13402 2215 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 LOC285095A0A1B0GVY8 99 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 CAPN8A6NHC0 703 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 PDLIM1O00151 329 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 TFEBP19484 476 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 SERPINB5P36952 375 aa21.98■■□□□ 1.11
TPM4-201ENST00000300933 HADHAP40939 763 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms