RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 DDR1Q08345 913 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GET4Q7L5D6 327 aaPredicted RBP13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 QRFPRQ96P65 431 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ACE2Q9BYF1 805 aaPredicted RBP13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FGFBP2Q9BYJ0 223 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 BTBD3Q9Y2F9 522 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MCIDASD6RGH6 385 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PAGE1O75459 146 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PURAQ00577 322 aaKnown RBP13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ABRAXAS1Q6UWZ7 409 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PTCHD4Q6ZW05 846 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 UBE2R2Q712K3 238 aaPredicted RBP13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MRPL57Q9BQC6 102 aaKnown RBP13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FAIM2Q9BWQ8 316 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CDH19Q9H159 772 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SGK2Q9HBY8 427 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 KLRC4O43908 158 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RPLP2P05387 115 aaKnown RBP13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 UQCRBP14927 111 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 BMP6P22004 513 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SEC13P55735 322 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SMAD3P84022 425 aaKnown RBP13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ANKRD52Q8NB46 1076 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RNPEPL1Q9HAU8 725 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 HMG20AQ9NP66 347 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 DEPDC5O75140 1603 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TCRBV9S1A1TA0A576 114 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FAM182AQ5T1J6 154 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 DHDDSQ86SQ9 333 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GSTCDQ8NEC7 633 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NEK7Q8TDX7 302 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FNIP1Q8TF40 1166 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SLC38A2Q96QD8 506 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 AGXT2Q9BYV1 514 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 KIF20BQ96Q89 1820 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NCANO14594 1321 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 G3V2T6 193 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 UNC5CO95185 931 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FTH1P02794 183 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MT-ND1P03886 318 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CHRNGP07510 517 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NOMO3P69849 1222 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MRPS5P82675 430 aaKnown RBP13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RGS1Q08116 209 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 DUSP4Q13115 394 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 OLFML2AQ68BL7 652 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SPPL2CQ8IUH8 684 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RAVER1Q8IY67 606 aaKnown RBP13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ATG10Q9H0Y0 220 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PCYOX1Q9UHG3 505 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 AK5Q9Y6K8 562 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ZNF780BQ9Y6R6 833 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MAGEC1O60732 1142 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TOP3BO95985 862 aaKnown RBP13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GABRR2P28476 465 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 OMPP47874 163 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PABPC1LQ4VXU2 614 aaKnown RBP13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MPPE1Q53F39 396 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 INTS11Q5TA45 600 aaKnown RBP13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CES5AQ6NT32 575 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TEX47Q8TBZ9 253 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SKA1Q96BD8 255 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RASSF1Q9NS23 344 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CNTNAP1P78357 1384 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 C15orf38-AP3S2A0A0A6YYH1 394 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PRR5-ARHGAP8B1AHC4 643 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ELFN1P0C7U0 828 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CLUP10909 449 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ITPKBP27987 946 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ADSSP30520 456 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ARHGAP8P85298 464 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RNF43Q68DV7 783 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PGBD2Q6P3X8 592 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ARPINQ7Z6K5 226 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TMPRSS11BQ86T26 416 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 IQCF2Q8IXL9 164 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 C12orf56Q8IXR9 622 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ULK2Q8IYT8 1036 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TRPM4Q8TD43 1214 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PIH1D2Q8WWB5 315 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 DNAJC19Q96DA6 116 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FCRL2Q96LA5 508 aaPredicted RBP13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 EBNA1BP2Q99848 306 aaKnown RBP13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 DGKBQ9Y6T7 804 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 LRRIQ1Q96JM4 1722 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TBC1D3DA0A087WVF3 549 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TBC1D3IA0A087WXS9 549 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TBC1D3EA0A087X179 549 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TBC1D3KA0A087X1G2 549 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FAM92AA1XBS5 289 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TBC1D3FA6NER0 549 aaPredicted RBP13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TBC1D3LB9A6J9 549 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 C1QTNF3-AMACRE9PGA6 284 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CXCL14O95715 111 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TBC1D3HP0C7X1 549 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CYP4F8P98187 520 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TBC1D3GQ6DHY5 549 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TBC1D3CQ6IPX1 549 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MZT2BQ6NZ67 158 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RFWD3Q6PCD5 774 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms