RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 PTPRAP18433 802 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 MAP3K7CLP57077 242 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 PCID2Q5JVF3 399 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 ARMCX2Q7L311 632 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 SAPCD2Q86UD0 394 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 RALGPS2Q86X27 583 aaPredicted RBP11.44□□□□□ -0.58
TRUB1-201ENST00000298746 SCAIQ8N9R8 606 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 TRPV3Q8NET8 790 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 DACH2Q96NX9 599 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 CASS4Q9NQ75 786 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 POLE4Q9NR33 117 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 ERGIC3Q9Y282 383 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 ERI2A8K979 691 aaKnown RBP11.44□□□□□ -0.58
TRUB1-201ENST00000298746 MTSS1O43312 755 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 OPRL1P41146 370 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 TKTL1P51854 596 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 INCA1Q0VD86 236 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 AASDHQ4L235 1098 aaPredicted RBP11.44□□□□□ -0.58
TRUB1-201ENST00000298746 MFSD4BQ5TF39 518 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 FBXO16Q8IX29 292 aaPredicted RBP11.44□□□□□ -0.58
TRUB1-201ENST00000298746 SLC15A3Q8IY34 581 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 ZNF555Q8NEP9 628 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 APPL2Q8NEU8 664 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 TRUB1Q8WWH5 349 aaKnown RBP11.44□□□□□ -0.58
TRUB1-201ENST00000298746 HTRA1Q92743 480 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 WNT8BQ93098 351 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 NSMCE2Q96MF7 247 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 MLPHQ9BV36 600 aaPredicted RBP11.44□□□□□ -0.58
TRUB1-201ENST00000298746 BRD8Q9H0E9 1235 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 GBA3Q9H227 469 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 PDZD7Q9H5P4 517 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 AKTIPQ9H8T0 292 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 CD320Q9NPF0 282 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 BTAF1O14981 1849 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 RBBP6Q7Z6E9 1792 aaKnown RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 NCF1BA6NI72 391 aaPredicted RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 NCF1CA8MVU1 366 aaPredicted RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 AURKAO14965 403 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 HBP1O60381 514 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 XYLBO75191 536 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 LTA4HP09960 611 aaKnown RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 NCF1P14598 390 aaPredicted RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 CYP2B6P20813 491 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 AKAP5P24588 427 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 GABRB3P28472 473 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 NOS2P35228 1153 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 ZNF846Q147U1 533 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 PFKFB4Q16877 469 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 PKN3Q6P5Z2 889 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 RETREG3Q86VR2 466 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 EPHX4Q8IUS5 362 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 ATPAF2Q8N5M1 289 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 PACRGLQ8N7B6 248 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 RAB2BQ8WUD1 216 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 CHPT1Q8WUD6 406 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 PPP1R13LQ8WUF5 828 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 TMEM74Q96NL1 305 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 TBL1YQ9BQ87 522 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 SMARCAD1Q9H4L7 1026 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 ALG2Q9H553 416 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 WDCPQ9H6R7 721 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 PIGVQ9NUD9 493 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 TMEM181Q9P2C4 612 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 TRHDEQ9UKU6 1024 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 AQP12BA6NM10 295 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 ZNF701M0R085 212 aaPredicted RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 GABBR2O75899 941 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 SIX3O95343 332 aaPredicted RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 NADKO95544 446 aaPredicted RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 DLGAP3O95886 979 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 IDO1P14902 403 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 ZNF24P17028 368 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 ADRA1BP35368 520 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 MAGEA12P43365 314 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 CHRNA4P43681 627 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 TSPY1Q01534 308 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 LIPEQ05469 1076 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 BNIP2Q12982 314 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 BTG3Q14201 252 aaPredicted RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 SLC36A3Q495N2 470 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 GJC2Q5T442 439 aaPredicted RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 GPR158Q5T848 1215 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 FKBP1CQ5VVH2 108 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 GADL1Q6ZQY3 521 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 CTU1Q7Z7A3 348 aaKnown RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 AQP12AQ8IXF9 295 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 C8orf59Q8N0T1 100 aaPredicted RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 OR7A2PQ8NGA2 310 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 PSMA8Q8TAA3 256 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 OSCP1Q8WVF1 389 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 HOPXQ9BPY8 73 aaPredicted RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 CHID1Q9BWS9 393 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 RHOBTB2Q9BYZ6 727 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 OSBPL2Q9H1P3 480 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 TNFRSF12AQ9NP84 129 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 ABCB10Q9NRK6 738 aa11.43□□□□□ -0.58
TRUB1-201ENST00000298746 TSR3Q9UJK0 312 aaKnown RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 TMA7Q9Y2S6 64 aaKnown RBP11.43□□□□□ -0.58
TRUB1-201ENST00000298746 AP3B1O00203 1094 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 MOCS2O96007 188 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms