RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 WT1P19544 449 aaPredicted RBP9.35□□□□□ -0.91
CNOT9-202ENST00000295701 EPHB2P29323 1055 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 PTPN9P43378 593 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 RGRP47804 291 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 LIG3P49916 1009 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 INHBCP55103 352 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 GEMIN4P57678 1058 aaKnown RBP9.35□□□□□ -0.91
CNOT9-202ENST00000295701 SRP54P61011 504 aaKnown RBP9.35□□□□□ -0.91
CNOT9-202ENST00000295701 POLR2FP61218 127 aaKnown RBP9.35□□□□□ -0.91
CNOT9-202ENST00000295701 UBE2HP62256 183 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 RAD51Q06609 339 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 POU4F2Q12837 409 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 NFATC3Q12968 1075 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 SERINC3Q13530 473 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 NFATC4Q14934 902 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 ELOCQ15369 112 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 TCP11X2Q5H9J9 407 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 SCYL2Q6P3W7 929 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 SLFN11Q7Z7L1 901 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 VASH2Q86V25 355 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 ZFAND4Q86XD8 727 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 CAMK1DQ8IU85 385 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 FAM114A1Q8IWE2 563 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 FSTL5Q8N475 847 aaPredicted RBP9.35□□□□□ -0.91
CNOT9-202ENST00000295701 RTL3Q8N8U3 475 aaKnown RBP9.35□□□□□ -0.91
CNOT9-202ENST00000295701 MSANTD4Q8NCY6 345 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 CCL4L1Q8NHW4 92 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 OR1E3Q8WZA6 343 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 EXTL1Q92935 676 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 ARHGEF26Q96DR7 871 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 PDXPQ96GD0 296 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 GRIP2Q9C0E4 1043 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 VPS16Q9H269 839 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 LRRN3Q9H3W5 708 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 SUV39H2Q9H5I1 410 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 CLMPQ9H6B4 373 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 TMEM51Q9NW97 253 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 GPATCH2LQ9NWQ4 482 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 PISDQ9UG56 409 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 FZD10Q9ULW2 581 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 MFHAS1Q9Y4C4 1052 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 DAAM1Q9Y4D1 1078 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 NAV2Q8IVL1 2488 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 DOPEY2Q9Y3R5 2298 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 ZSCAN5CA6NGD5 496 aaPredicted RBP9.34□□□□□ -0.91
CNOT9-202ENST00000295701 A8MX80 341 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 RASGRP1O95267 797 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 TNFP01375 233 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 ALPIP09923 528 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 GM2AP17900 193 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 GPD1P21695 349 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 XPAP23025 273 aaPredicted RBP9.34□□□□□ -0.91
CNOT9-202ENST00000295701 SOX5P35711 763 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 PEX5P50542 639 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 BLKP51451 505 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 JAM2P57087 298 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 RPL7AP62424 266 aaKnown RBP9.34□□□□□ -0.91
CNOT9-202ENST00000295701 CYP4F2P78329 520 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 UGP2Q16851 508 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 INO80DQ53TQ3 878 aaPredicted RBP9.34□□□□□ -0.91
CNOT9-202ENST00000295701 ZNF385CQ66K41 422 aaPredicted RBP9.34□□□□□ -0.91
CNOT9-202ENST00000295701 RIPOR1Q6ZS17 1223 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 GKN2Q86XP6 184 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 ZNF677Q86XU0 584 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 CCNJLQ8IV13 435 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 SVOPQ8N4V2 548 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 GPR156Q8NFN8 814 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 WDR48Q8TAF3 677 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 SCG3Q8WXD2 468 aaKnown RBP9.34□□□□□ -0.91
CNOT9-202ENST00000295701 NTAN1Q96AB6 310 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 CELF6Q96J87 481 aaKnown RBP9.34□□□□□ -0.91
CNOT9-202ENST00000295701 NCAPGQ9BPX3 1015 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 SELENOOQ9BVL4 669 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 LGR4Q9BXB1 951 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 C1QTNF7Q9BXJ2 289 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 SEMA6CQ9H3T2 930 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 CLSTN2Q9H4D0 955 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 RETREG1Q9H6L5 497 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 PDFQ9HBH1 243 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 FAM207AQ9NSI2 230 aaPredicted RBP9.34□□□□□ -0.91
CNOT9-202ENST00000295701 ADAM22Q9P0K1 906 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 FOXJ2Q9P0K8 574 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 KLQ9UEF7 1012 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 LOXL2Q9Y4K0 774 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 RNF215Q9Y6U7 377 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 HECTD1Q9ULT8 2610 aa9.34□□□□□ -0.91
CNOT9-202ENST00000295701 PRAMEF33A0A0G2JMD5 474 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 TCRBV5S1A1TA0A578 114 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 TSPAN11A1L157 253 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 TMEM110-MUSTN1A8MSY1 372 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 WASH4PA8MWX3 477 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 TOR1BO14657 336 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 PRAMEF10O60809 474 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 WISP1O95388 367 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 JMJD7P0C870 316 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 ITGB6P18564 788 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 ERCC5P28715 1186 aaPredicted RBP9.33□□□□□ -0.92
CNOT9-202ENST00000295701 MMP12P39900 470 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 MAPK10P53779 464 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 OGDHQ02218 1023 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms