RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 RPL22P35268 128 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-201ENST00000293748 TKTL1P51854 596 aa11.89□□□□□ -0.51
SYNGAP1-201ENST00000293748 FUT10Q6P4F1 479 aa11.89□□□□□ -0.51
SYNGAP1-201ENST00000293748 ISLR2Q6UXK2 745 aa11.89□□□□□ -0.51
SYNGAP1-201ENST00000293748 C12orf56Q8IXR9 622 aa11.89□□□□□ -0.51
SYNGAP1-201ENST00000293748 CDK20Q8IZL9 346 aa11.89□□□□□ -0.51
SYNGAP1-201ENST00000293748 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-201ENST00000293748 QKIQ96PU8 341 aaKnown RBP eCLIP11.89□□□□□ -0.51
SYNGAP1-201ENST00000293748 AHSPQ9NZD4 102 aa11.89□□□□□ -0.51
SYNGAP1-201ENST00000293748 LEF1Q9UJU2 399 aaPredicted RBP11.89□□□□□ -0.51
SYNGAP1-201ENST00000293748 A0A0A0MRY4 1105 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 KCNK1O00180 336 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 CCNT2O60583 730 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 SEC22BO75396 215 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 PBX1P40424 430 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 STAT5AP42229 794 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 BNC1Q01954 994 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 QPCTQ16769 361 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 UBXN11Q5T124 520 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 DNAJC14Q6Y2X3 702 aaPredicted RBP11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 BBS12Q6ZW61 710 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 MILR1Q7Z6M3 343 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 TMCO2Q7Z6W1 182 aaPredicted RBP11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 MIB1Q86YT6 1006 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 SEMA4DQ92854 862 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 SPATA13Q96N96 652 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 UNKQ9C0B0 810 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 LOC100506127A0A0U1RQW1 187 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 H3BN98 237 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 EPHB6O15197 1021 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 GSC2O15499 205 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 IRF1P10914 325 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 FLT3P36888 993 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 GATMP50440 423 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 NDST1P52848 882 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 NEPROQ6NW34 567 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 C11orf96Q7Z7L8 435 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 LNX1Q8TBB1 728 aaPredicted RBP11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 RDH11Q8TC12 318 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 ASZ1Q8WWH4 475 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZHX1-C8orf76Q96EF9 292 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 CASD1Q96PB1 797 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 TTPALQ9BTX7 342 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 CCNB1IP1Q9NPC3 277 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 ABCB10Q9NRK6 738 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 TMEM216Q9P0N5 145 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 SH3GLB1Q9Y371 365 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 ARIH1Q9Y4X5 557 aaPredicted RBP11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 TNPO3Q9Y5L0 923 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 NT5C1B-RDH14C9J2C7 533 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 NRP1O14786 923 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 AREL1O15033 823 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 ETS2P15036 469 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 KCNE1P15382 129 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZNF7P17097 686 aaPredicted RBP11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 SLC6A3Q01959 620 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 CTXN3Q4LDR2 81 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 AADACL2Q6P093 401 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 CLNKQ7Z7G1 428 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZNF598Q86UK7 904 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 RTN4RL1Q86UN2 441 aaPredicted RBP11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 FAM71AQ8IYT1 594 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 IGSF21Q96ID5 467 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 CEP41Q9BYV8 373 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 REXO2Q9Y3B8 237 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 CLUHO75153 1309 aa11.88□□□□□ -0.51
SYNGAP1-201ENST00000293748 BCLAF3A2AJT9 711 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 SIGLEC16A6NMB1 481 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 H3BMM5 538 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 GALTP07902 379 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 WARSP23381 471 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 FEN1P39748 380 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 PBX2P40425 430 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 MTA1Q13330 715 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 CES3Q6UWW8 571 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZNF513Q8N8E2 541 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 BPIFB6Q8NFQ5 453 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 FBXO32Q969P5 355 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 CERS2Q96G23 380 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 SLC4A5Q9BY07 1137 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 MRPL39Q9NYK5 338 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 SH3BP4Q9P0V3 963 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 TMA7Q9Y2S6 64 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 FRMPD3Q5JV73 1810 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 H3BNX3 289 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 SYN3O14994 580 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 HOXB6P17509 224 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 SLC11A1P49279 550 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 CENPAP49450 140 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 PLK1P53350 603 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 DLG4P78352 724 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 PLD1Q13393 1074 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZNF284Q2VY69 593 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 CLLU1OSQ5K130 101 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 GPR107Q5VW38 600 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 GALNT8Q9NY28 637 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 TAS2R14Q9NYV8 317 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 CNTN3Q9P232 1028 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZNF624Q9P2J8 865 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 DKK3Q9UBP4 350 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms