RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 BPGMP07738 259 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 RBP1P09455 135 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 ZNF7P17097 686 aaPredicted RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 FSHRP23945 695 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 HOXD9P28356 352 aaPredicted RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 MAGEA10P43363 369 aaPredicted RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 POU4F1Q01851 419 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 PITRM1Q5JRX3 1037 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 MBLAC2Q68D91 279 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 KCTD11Q693B1 232 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 ZC3HC1Q86WB0 502 aaKnown RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 CELF5Q8N6W0 485 aaKnown RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 OR2AP1Q8NGE2 309 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 SORCS1Q8WY21 1168 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 TMEM120AQ9BXJ8 343 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 RASSF4Q9H2L5 321 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 ZFP14Q9HCL3 533 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 SPHK2Q9NRA0 654 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 GGA2Q9UJY4 613 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 RNF112Q9ULX5 631 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 SRRM3A6NNA2 597 aaPredicted RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 SMAD6O43541 496 aaKnown RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 LZTS3O60299 673 aaPredicted RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 SKAP2O75563 359 aaPredicted RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 UBOX5O94941 541 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 ALDOAP04075 364 aaKnown RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 TFEBP19484 476 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 RGS4P49798 205 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 SLC20A2Q08357 652 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 ITIH4Q14624 930 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 PDCD2Q16342 344 aaPredicted RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 HECTD2Q5U5R9 776 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 STEAP4Q687X5 459 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 CFAP61Q8NHU2 1237 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 SUSD6Q92537 303 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 IL21Q9HBE4 155 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 SSU72Q9NP77 194 aaKnown RBP9.34□□□□□ -0.91
SSR3-201ENST00000265044 NCKIPSDQ9NZQ3 722 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 ARHGAP26Q9UNA1 814 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 LZTS1Q9Y250 596 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 BRWD1Q9NSI6 2320 aa9.34□□□□□ -0.91
SSR3-201ENST00000265044 GOLGA8QA0A0J9YX86 632 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 GOLGA8OA6NCC3 632 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 CFAP99D6REC4 459 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 F8W8V4 182 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 GOLGA8NF8WBI6 632 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 PLIN3O60664 434 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 NFATC1O95644 943 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 EPOP01588 193 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 LTA4HP09960 611 aaKnown RBP9.33□□□□□ -0.92
SSR3-201ENST00000265044 WASP42768 502 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 TTPAP49638 278 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 ARSDP51689 593 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 HTRA4P83105 476 aaPredicted RBP9.33□□□□□ -0.92
SSR3-201ENST00000265044 FBXL19Q6PCT2 694 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 KDELC1Q6UW63 502 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 KIAA0408Q6ZU52 694 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 ACAD11Q709F0 780 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 PGBD5Q8N414 524 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 KIF2BQ8N4N8 673 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 DNAJC5GQ8N7S2 189 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 ARRDC2Q8TBH0 407 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 BPIFB1Q8TDL5 484 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 MYLIPQ8WY64 445 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 CLP1Q92989 425 aaKnown RBP9.33□□□□□ -0.92
SSR3-201ENST00000265044 KLHL32Q96NJ5 620 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 ZNF317Q96PQ6 595 aaPredicted RBP9.33□□□□□ -0.92
SSR3-201ENST00000265044 SMIM14Q96QK8 99 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 SPATA16Q9BXB7 569 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 MRPL46Q9H2W6 279 aaKnown RBP9.33□□□□□ -0.92
SSR3-201ENST00000265044 ANKRD6Q9Y2G4 727 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 POP4O95707 220 aaKnown RBP9.33□□□□□ -0.92
SSR3-201ENST00000265044 LATS1O95835 1130 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 MAGEA3P43357 314 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 CCNHP51946 323 aaPredicted RBP9.33□□□□□ -0.92
SSR3-201ENST00000265044 SLC7A9P82251 487 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 SLC18A2Q05940 514 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 CYTH1Q15438 398 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 ZNF284Q2VY69 593 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 EML3Q32P44 896 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 INO80DQ53TQ3 878 aaPredicted RBP9.33□□□□□ -0.92
SSR3-201ENST00000265044 RBM20Q5T481 1227 aaKnown RBP9.33□□□□□ -0.92
SSR3-201ENST00000265044 FAM45BPQ6NSW5 357 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 HTR3DQ70Z44 454 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 LYSMD3Q7Z3D4 306 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 CRIPAKQ8N1N5 446 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 FAM45AQ8TCE6 357 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 POLR3BQ9NW08 1133 aaPredicted RBP9.33□□□□□ -0.92
SSR3-201ENST00000265044 COPG2Q9UBF2 871 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 TBC1D30Q9Y2I9 924 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 STARD13Q9Y3M8 1113 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 LOC100653049A0A140TA62 436 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 BTN3A1O00481 513 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 CLASP2O75122 1294 aaKnown RBP9.33□□□□□ -0.92
SSR3-201ENST00000265044 KRT34O76011 436 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 ALDH1A2O94788 518 aa9.33□□□□□ -0.92
SSR3-201ENST00000265044 ENO1P06733 434 aaKnown RBP9.33□□□□□ -0.92
SSR3-201ENST00000265044 CEBPBP17676 345 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms