RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 WBP11Q9Y2W2 641 aaKnown RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 LOC110117498-PIK3R3F6TDL0 507 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 NOL9Q5SY16 702 aaKnown RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 KIAA0319LQ8IZA0 1049 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 EIF1ADQ8N9N8 165 aaKnown RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 FAM47BQ8NA70 645 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 PIGKQ92643 395 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 PRDM12Q9H4Q4 367 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 BRD9Q9H8M2 597 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 SALL3Q9BXA9 1300 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 TCRBV9S1A1TA0A576 114 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 TUFMP49411 452 aaKnown RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 STX12Q86Y82 276 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 CSGALNACT1Q8TDX6 532 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 PURBQ96QR8 312 aaKnown RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 MRPL17Q9NRX2 175 aaKnown RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 ABHD14A-ACY1A0A1B0GW23 586 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 A0A1W2PRG6 482 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 OTCP00480 354 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 AKR1D1P51857 326 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 SNRPD1P62314 119 aaKnown RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 SRSF11Q05519 484 aaKnown RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 LDLRAP1Q5SW96 308 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 RASAL3Q86YV0 1011 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 FAM71AQ8IYT1 594 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 ZNF398Q8TD17 642 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 COPS5Q92905 334 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 UBE2E3Q969T4 207 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 CLPTM1LQ96KA5 538 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 DNMT3LQ9UJW3 386 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 PSME2Q9UL46 239 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 TBC1D3BA6NDS4 549 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 LGR5O75473 907 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 FAM155BO75949 473 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 VEGFAP15692 232 aaPredicted RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 BMP7P18075 431 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 MPSTP25325 297 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 CDH13P55290 713 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 TAS2R41P59536 307 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 DLG2Q15700 870 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 SH3RF1Q7Z6J0 888 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 GPR180Q86V85 440 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 MREGQ8N565 214 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 VANGL1Q8TAA9 524 aaPredicted RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 AP3S1Q92572 193 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 PPP1R16AQ96I34 528 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 SLC25A12O75746 678 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 ACVR2BQ13705 512 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 USP50Q70EL3 339 aaPredicted RBP18.02■□□□□ 0.48
COL5A3-201ENST00000264828 SPPL2CQ8IUH8 684 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 PNPT1Q8TCS8 783 aaKnown RBP18.02■□□□□ 0.48
COL5A3-201ENST00000264828 KLHL32Q96NJ5 620 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 AMD1P17707 334 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 ROR2Q01974 943 aaKnown RBP18.02■□□□□ 0.48
COL5A3-201ENST00000264828 FSCN1Q16658 493 aaKnown RBP18.02■□□□□ 0.48
COL5A3-201ENST00000264828 C6orf52Q5T4I8 152 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 FAM151BQ6UXP7 276 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 DPF3Q92784 378 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 CCDC162PA2VCL2 907 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 C5orf22Q49AR2 442 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 SLC34A3Q8N130 599 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 C12orf29Q8N999 325 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 SOCS4Q8WXH5 440 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 CD101Q93033 1021 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 ABCB9Q9NP78 766 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 ADGRE2Q9UHX3 823 aa18.02■□□□□ 0.48
COL5A3-201ENST00000264828 GALK1P51570 392 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 THOP1P52888 689 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 VGLL4Q14135 290 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 CARTPTQ16568 116 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 PACS1Q6VY07 963 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 KLHL23Q8NBE8 558 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 ATL1Q8WXF7 558 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 TMEM39AQ9NV64 488 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 KRT33AO76009 404 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 ZNF135P52742 658 aaPredicted RBP18.02■□□□□ 0.47
COL5A3-201ENST00000264828 SCRN3Q0VDG4 424 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 C1QTNF7Q9BXJ2 289 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 IDI2Q9BXS1 227 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 TMEM134Q9H6X4 195 aa18.02■□□□□ 0.47
COL5A3-201ENST00000264828 WDR55Q9H6Y2 383 aaPredicted RBP18.02■□□□□ 0.47
COL5A3-201ENST00000264828 WWP2O00308 870 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 CASKO14936 926 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 RDH11Q8TC12 318 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 LPPQ93052 612 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 FERD3LQ96RJ6 166 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 C2orf49Q9BVC5 232 aaPredicted RBP18.01■□□□□ 0.47
COL5A3-201ENST00000264828 SLC27A5Q9Y2P5 690 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 SUV39H1O43463 412 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 GMFGO60234 142 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 MAGEC1O60732 1142 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 SLC22A3O75751 556 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 NUDT17P0C025 328 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 IDO1P14902 403 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 CXCR2P25025 360 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 SKP1P63208 163 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 CYP4F8P98187 520 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 IL17AQ16552 155 aa18.01■□□□□ 0.47
COL5A3-201ENST00000264828 DAW1Q8N136 415 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms