RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CES1P23141 567 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 NFKBIAP25963 317 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 VIPR1P32241 457 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 SRP54P61011 504 aaKnown RBP16.12■□□□□ 0.17
USE1-201ENST00000263897 ITKQ08881 620 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 SLC10A2Q12908 348 aaPredicted RBP16.12■□□□□ 0.17
USE1-201ENST00000263897 ZFYVE27Q5T4F4 411 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 ARMC12Q5T9G4 340 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 TIGD7Q6NT04 549 aaPredicted RBP16.12■□□□□ 0.17
USE1-201ENST00000263897 SARM1Q6SZW1 724 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 SDR16C5Q8N3Y7 309 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 FSTL5Q8N475 847 aaPredicted RBP16.12■□□□□ 0.17
USE1-201ENST00000263897 ATL2Q8NHH9 583 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 COQ10AQ96MF6 247 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 WDR92Q96MX6 357 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 NRSN2Q9GZP1 204 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 RBM22Q9NW64 420 aaKnown RBP eCLIP16.12■□□□□ 0.17
USE1-201ENST00000263897 KCTD5Q9NXV2 234 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 AMACRQ9UHK6 382 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 INTUQ9ULD6 942 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 CPED1A4D0V7 1026 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 EME2A4GXA9 379 aaPredicted RBP16.11■□□□□ 0.17
USE1-201ENST00000263897 HEXIM1O94992 359 aaKnown RBP16.11■□□□□ 0.17
USE1-201ENST00000263897 CYP2A6P11509 494 aaPredicted RBP16.11■□□□□ 0.17
USE1-201ENST00000263897 CTSEP14091 401 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 CCNB1P14635 433 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 MX2P20592 715 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 GBE1Q04446 702 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 RTP5Q14D33 572 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 TCEAL1Q15170 157 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 ELOCQ15369 112 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 CNGA3Q16281 694 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 CDKN3Q16667 212 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 C6orf132Q5T0Z8 1188 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 CDCP2Q5VXM1 449 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 ALG1LQ6GMV1 187 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 PNCKQ6P2M8 343 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 LVRNQ6Q4G3 990 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 NYAP1Q6ZVC0 841 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 RD3Q7Z3Z2 195 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 TPCN2Q8NHX9 752 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 IFI44Q8TCB0 444 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 PIH1D2Q8WWB5 315 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 GLMNQ92990 594 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 FUBP1Q96AE4 644 aaKnown RBP16.11■□□□□ 0.17
USE1-201ENST00000263897 NXPE2Q96DL1 559 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 MCCC1Q96RQ3 725 aaPredicted RBP16.11■□□□□ 0.17
USE1-201ENST00000263897 TRIM5Q9C035 493 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 POLR1EQ9GZS1 481 aaKnown RBP16.11■□□□□ 0.17
USE1-201ENST00000263897 ABCG4Q9H172 646 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 KLQ9UEF7 1012 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 RAXQ9Y2V3 346 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 RAI2Q9Y5P3 530 aa16.11■□□□□ 0.17
USE1-201ENST00000263897 LRRD1A4D1F6 860 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 TMEM202A6NGA9 273 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 ZNF487B1APH4 448 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 CACNB4O00305 520 aaPredicted RBP16.1■□□□□ 0.17
USE1-201ENST00000263897 TNFRSF10CO14798 259 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 FZD6O60353 706 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 TNFP01375 233 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 PDHA1P08559 390 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 ALPIP09923 528 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 RPIAP49247 311 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 KIAA1024LP59773 190 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 IHHQ14623 411 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 PTPRRQ15256 657 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 NR0B2Q15466 257 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 LRRC38Q5VT99 294 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 ESRP1Q6NXG1 681 aaKnown RBP16.1■□□□□ 0.17
USE1-201ENST00000263897 GUSBP11Q6P575 273 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 EFL1Q7Z2Z2 1120 aaKnown RBP16.1■□□□□ 0.17
USE1-201ENST00000263897 VSIG1Q86XK7 387 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 SLC35F3Q8IY50 421 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 NDUFAF2Q8N183 169 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 PELI3Q8N2H9 469 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 CCNYQ8ND76 341 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 OR56A4Q8NGH8 313 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 LRRN4Q8WUT4 740 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 SCG3Q8WXD2 468 aaKnown RBP16.1■□□□□ 0.17
USE1-201ENST00000263897 DTLQ9NZJ0 730 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 AK5Q9Y6K8 562 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 DGKBQ9Y6T7 804 aa16.1■□□□□ 0.17
USE1-201ENST00000263897 NPIPB15A6NHN6 443 aaPredicted RBP16.09■□□□□ 0.17
USE1-201ENST00000263897 C3orf70A6NLC5 250 aaPredicted RBP16.09■□□□□ 0.17
USE1-201ENST00000263897 PSMD11O00231 422 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 CELA2BP08218 269 aaPredicted RBP16.09■□□□□ 0.17
USE1-201ENST00000263897 KRT10P13645 584 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 LHCGRP22888 699 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 KELP23276 732 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 SLC1A1P43005 524 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 DSC2Q02487 901 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 DENND2CQ68D51 928 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 KCTD16Q68DU8 428 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 HSD11B1LQ7Z5J1 315 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 GKN2Q86XP6 184 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.09■□□□□ 0.17
USE1-201ENST00000263897 TC2NQ8N9U0 490 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 ARRDC2Q8TBH0 407 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 MAPK15Q8TD08 544 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 OR1E3Q8WZA6 343 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms