RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 H7C0C1 242 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 AGPSO00116 658 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 EEF2KO00418 725 aaKnown RBP13.45□□□□□ -0.26
SGCA-201ENST00000262018 MID1O15344 667 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 MSI1O43347 362 aaKnown RBP13.45□□□□□ -0.26
SGCA-201ENST00000262018 RNASEH2AO75792 299 aaKnown RBP13.45□□□□□ -0.26
SGCA-201ENST00000262018 IGLV3-27P01718 113 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 ZSCAN5DPP0CG00 497 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 ETS1P14921 441 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 HLA-FP30511 346 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 ATP5OP48047 213 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 HARS2P49590 506 aaKnown RBP13.45□□□□□ -0.26
SGCA-201ENST00000262018 VPS41P49754 854 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 GDF10P55107 478 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 TBX4P57082 545 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 CBX1P83916 185 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 SKOR1P84550 965 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 SERINC3Q13530 473 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 DPYSQ14117 519 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 SLMAPQ14BN4 828 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 PAFAH1B3Q15102 231 aaKnown RBP13.45□□□□□ -0.26
SGCA-201ENST00000262018 UAP1Q16222 522 aaPredicted RBP13.45□□□□□ -0.26
SGCA-201ENST00000262018 P3H1Q32P28 736 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 CFAP58Q5T655 872 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 NUGGCQ68CJ6 796 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 DARS2Q6PI48 645 aaKnown RBP13.45□□□□□ -0.26
SGCA-201ENST00000262018 IGF2-ASQ6U949 168 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 BZW1Q7L1Q6 419 aaKnown RBP13.45□□□□□ -0.26
SGCA-201ENST00000262018 SLC25A45Q8N413 288 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 CPXM2Q8N436 756 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 MFSD2AQ8NA29 543 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 CCNL2Q96S94 520 aaPredicted RBP13.45□□□□□ -0.26
SGCA-201ENST00000262018 OMDQ99983 421 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 FOXP3Q9BZS1 431 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 TKTL2Q9H0I9 626 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 TSPYL1Q9H0U9 437 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 RSPH9Q9H1X1 276 aaPredicted RBP13.45□□□□□ -0.26
SGCA-201ENST00000262018 USP29Q9HBJ7 922 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 ABCB8Q9NUT2 735 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 A0A1W2PNU3 283 aaPredicted RBP13.44□□□□□ -0.26
SGCA-201ENST00000262018 HACD1B0YJ81 288 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 FFAR2O15552 330 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 RNASEH1O60930 286 aaKnown RBP13.44□□□□□ -0.26
SGCA-201ENST00000262018 DLDP09622 509 aaKnown RBP13.44□□□□□ -0.26
SGCA-201ENST00000262018 FAM87AP0C7U9 286 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 SLC2A3P11169 496 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 RPL22P35268 128 aaKnown RBP13.44□□□□□ -0.26
SGCA-201ENST00000262018 GBE1Q04446 702 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 SLC10A2Q12908 348 aaPredicted RBP13.44□□□□□ -0.26
SGCA-201ENST00000262018 GPS1Q13098 491 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 ISXQ2M1V0 245 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 FOXR1Q6PIV2 292 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 LRIG3Q6UXM1 1119 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 RFX8Q6ZV50 586 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 USP53Q70EK8 1073 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 ADIPOR2Q86V24 386 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 ZC3H18Q86VM9 953 aaKnown RBP13.44□□□□□ -0.26
SGCA-201ENST00000262018 CDKL3Q8IVW4 592 aaPredicted RBP13.44□□□□□ -0.26
SGCA-201ENST00000262018 OR4C6Q8NH72 309 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 ZIM3Q96PE6 472 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 HAPLN3Q96S86 360 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 SH3GL2Q99962 352 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 C10orf88Q9H8K7 445 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 ETNK2Q9NVF9 386 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 TPX2Q9ULW0 747 aaKnown RBP13.44□□□□□ -0.26
SGCA-201ENST00000262018 HEY1Q9Y5J3 304 aa13.44□□□□□ -0.26
SGCA-201ENST00000262018 USP9YO00507 2555 aaPredicted RBP13.44□□□□□ -0.26
SGCA-201ENST00000262018 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.43□□□□□ -0.26
SGCA-201ENST00000262018 ENO4A6NNW6 628 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 FAM72CH0Y354 149 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 H3BQF6 201 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 EFSO43281 561 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 CREB3O43889 395 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 LATS1O95835 1130 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 SYF2O95926 243 aaKnown RBP13.43□□□□□ -0.26
SGCA-201ENST00000262018 IFNB1P01574 187 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 APOEP02649 317 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 ATP5BP06576 529 aaKnown RBP13.43□□□□□ -0.26
SGCA-201ENST00000262018 PABPC1P11940 636 aaKnown RBP13.43□□□□□ -0.26
SGCA-201ENST00000262018 CKMT1AP12532 417 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 HOXD9P28356 352 aaPredicted RBP13.43□□□□□ -0.26
SGCA-201ENST00000262018 CCR1P32246 355 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 GGCXP38435 758 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 PMS2P54278 862 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 MTA1Q13330 715 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 MORF4L2Q15014 288 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 CST6Q15828 149 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 MPPE1Q53F39 396 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 RNASEH2BQ5TBB1 312 aaKnown RBP13.43□□□□□ -0.26
SGCA-201ENST00000262018 FAM72AQ5TYM5 149 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 MBLAC2Q68D91 279 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 NAPEPLDQ6IQ20 393 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 FAM72DQ6L9T8 149 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 PCGF5Q86SE9 256 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 FAM72BQ86X60 149 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 FAM71DQ8N9W8 422 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 OR14C36Q8NHC7 312 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 RNF34Q969K3 372 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 ATXN7L3BQ96GX2 97 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 SLC39A13Q96H72 371 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms