RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CDK9P50750 372 aaKnown RBP13.03□□□□□ -0.32
SNX1-201ENST00000261889 GRIK4Q16099 956 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 NHSL2Q5HYW2 709 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 METTL21CQ5VZV1 264 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 NANOGP8Q6NSW7 305 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 GALNT18Q6P9A2 607 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 BEST2Q8NFU1 509 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 ZNF597Q96LX8 424 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 COG8Q96MW5 612 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 GBA3Q9H227 469 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 ZFYVE28Q9HCC9 887 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 NDUFA13Q9P0J0 144 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 RBPJLQ9UBG7 517 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 U3KQV3 271 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 PIP5K1BO14986 540 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 NOBOXO60393 691 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 CTSHP09668 335 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 MATN1P21941 496 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 FSHRP23945 695 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 EDNRBP24530 442 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 CDK18Q07002 472 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 CDH17Q12864 832 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 TMEM209Q96SK2 561 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 NPY6RQ99463 290 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 CCDC90BQ9GZT6 254 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 UNC93B1Q9H1C4 597 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 MIR1-1HGQ9H1L0 117 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 ABCG8Q9H221 673 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 WDR6Q9NNW5 1121 aaKnown RBP13.03□□□□□ -0.32
SNX1-201ENST00000261889 SLC38A7Q9NVC3 462 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 RBM22Q9NW64 420 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNX1-201ENST00000261889 IGSF9Q9P2J2 1179 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 TRAF6Q9Y4K3 522 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 DHRS12A0PJE2 317 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 PTGES3LE9PB15 166 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 NPR3P17342 541 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 MAGEA12P43365 314 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 SH3BP2P78314 561 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 LYSMD3Q7Z3D4 306 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 ZNF513Q8N8E2 541 aaPredicted RBP13.02□□□□□ -0.32
SNX1-201ENST00000261889 APBB2Q92870 758 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 HDAC10Q969S8 669 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 RNF145Q96MT1 663 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 CCDC28BQ9BUN5 200 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 COLEC11Q9BWP8 271 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 FAM96AQ9H5X1 160 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 PNPLA3Q9NST1 481 aa13.02□□□□□ -0.32
SNX1-201ENST00000261889 TARM1B6A8C7 271 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 HLA-DQB2P05538 268 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 HMBSP08397 361 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 PIK3CGP48736 1102 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 TIGD2Q4W5G0 525 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 STXBP5Q5T5C0 1151 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 PTERQ96BW5 349 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 PCED1BQ96HM7 432 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 TBL1YQ9BQ87 522 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 OSBPL6Q9BZF3 934 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 MAF1Q9H063 256 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 FANCEQ9HB96 536 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 CRTAC1Q9NQ79 661 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 MAP10Q9P2G4 905 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 STAP1Q9ULZ2 295 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 INVSQ9Y283 1065 aa13.02□□□□□ -0.33
SNX1-201ENST00000261889 RSL1D1O76021 490 aaKnown RBP13.01□□□□□ -0.33
SNX1-201ENST00000261889 TOMM70O94826 608 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 PIM1P11309 404 aaPredicted RBP13.01□□□□□ -0.33
SNX1-201ENST00000261889 PRDX6P30041 224 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 GSSP48637 474 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 ESRRGP62508 458 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 ARHGAP1Q07960 439 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 TTLL4Q14679 1199 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 MARCH8Q5T0T0 291 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 KCTD11Q693B1 232 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 NEPROQ6NW34 567 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 TAC4Q86UU9 113 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 RIOX2Q8IUF8 465 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 ERI1Q8IV48 349 aaKnown RBP13.01□□□□□ -0.33
SNX1-201ENST00000261889 SLC15A4Q8N697 577 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 ZNF784Q8NCA9 323 aaPredicted RBP13.01□□□□□ -0.33
SNX1-201ENST00000261889 DDI1Q8WTU0 396 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 TANKQ92844 425 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 SNX27Q96L92 541 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 TEKT5Q96M29 485 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 MPHOSPH6Q99547 160 aaKnown RBP13.01□□□□□ -0.33
SNX1-201ENST00000261889 NAT9Q9BTE0 207 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 UPF3AQ9H1J1 476 aaKnown RBP13.01□□□□□ -0.33
SNX1-201ENST00000261889 NT5MQ9NPB1 228 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 INTS7Q9NVH2 962 aaKnown RBP13.01□□□□□ -0.33
SNX1-201ENST00000261889 CMTM6Q9NX76 183 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 UBA6A0AVT1 1052 aaPredicted RBP13.01□□□□□ -0.33
SNX1-201ENST00000261889 OR4Q2P0C623 313 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 OCM2P0CE71 109 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 OCMP0CE72 109 aaPredicted RBP13.01□□□□□ -0.33
SNX1-201ENST00000261889 PRKACGP22612 351 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 MAP4P27816 1152 aaKnown RBP13.01□□□□□ -0.33
SNX1-201ENST00000261889 LILRA4P59901 499 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 UGT3A2Q3SY77 523 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 TWF2Q6IBS0 349 aaKnown RBP13.01□□□□□ -0.33
SNX1-201ENST00000261889 STRADAQ7RTN6 431 aa13.01□□□□□ -0.33
SNX1-201ENST00000261889 PLPPR4Q7Z2D5 763 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms