RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 VIPR1P32241 457 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 PDIA2Q13087 525 aaKnown RBP15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 CBLBQ13191 982 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 FASTKD3Q14CZ7 662 aaKnown RBP15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 DNAJC21Q5F1R6 531 aaKnown RBP15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 HP1BP3Q5SSJ5 553 aaPredicted RBP15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 LRRC66Q68CR7 880 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 TSSK4Q6SA08 328 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 CENPUQ71F23 418 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 LYSMD3Q7Z3D4 306 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 GLT6D1Q7Z4J2 308 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 FAM124AQ86V42 546 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 CCDC25Q86WR0 208 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 BRSK1Q8TDC3 778 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 FOXP3Q9BZS1 431 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 C11orf16Q9NQ32 467 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 PRMT8Q9NR22 394 aaPredicted RBP15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 HACD3Q9P035 362 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 RAB21Q9UL25 225 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 NCKAP1Q9Y2A7 1128 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 ARL5AQ9Y689 179 aa15.84■□□□□ 0.13
CCDC90B-201ENST00000260054 NUMA1Q14980 2115 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 C1orf232A0A0U1RR37 186 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 FAM86C2PA6NEL3 165 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 SLC7A4O43246 635 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 PLRG1O43660 514 aaKnown RBP15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 LDB2O43679 373 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 CLDN7O95471 211 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 IGLV3-19P01714 112 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 SLC4A1P02730 911 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 FAM153BP0C7A2 387 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 CYP2A6P11509 494 aaPredicted RBP15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 ADPRHP54922 357 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 DMWDQ09019 674 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 CCDC15Q0P6D6 951 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 ELP6Q0PNE2 266 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 SEPT6Q14141 434 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 FAM153CQ494X1 144 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 PCID2Q5JVF3 399 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 IGDCC3Q8IVU1 814 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 TTC30BQ8N4P2 665 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 OR14C36Q8NHC7 312 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 RLN3Q8WXF3 142 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 ZNF778Q96MU6 729 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 RANBP9Q96S59 729 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 TRIM56Q9BRZ2 755 aaKnown RBP15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 PHACTR1Q9C0D0 580 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 TRABDQ9H4I3 376 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 ZFYVE1Q9HBF4 777 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 KCTD3Q9Y597 815 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 TEX264Q9Y6I9 313 aa15.83■□□□□ 0.13
CCDC90B-201ENST00000260054 CCDC78A2IDD5 438 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 LAMTOR5O43504 91 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 BUD23O43709 281 aaKnown RBP15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 AP1G1O43747 822 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 TDGF1P13385 188 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 ADRA1DP25100 572 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 NFKBIAP25963 317 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 ACSL1P33121 698 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 ELK3P41970 407 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 PTSQ03393 145 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 SFSWAPQ12872 951 aaKnown RBP15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 TAF1AQ15573 450 aaPredicted RBP15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 CNGA3Q16281 694 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 CASC4Q6P4E1 433 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 TMC3Q7Z5M5 1100 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 C1orf210Q8IVY1 113 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 ZBED8Q8IZ13 594 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 MAML2Q8IZL2 1156 aaPredicted RBP15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 DTWD2Q8NBA8 298 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 SRPK1Q96SB4 655 aaKnown RBP15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 WRAP53Q9BUR4 548 aaKnown RBP15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 GPR63Q9BZJ6 419 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 SAYSD1Q9NPB0 183 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 CHRAC1Q9NRG0 131 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 CYP8B1Q9UNU6 501 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 CHMP2BQ9UQN3 213 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 TCAF1Q9Y4C2 921 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 MAD1L1Q9Y6D9 718 aa15.83■□□□□ 0.12
CCDC90B-201ENST00000260054 HEATR9A2RTY3 570 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 MROH6A6NGR9 719 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 NEMP1O14524 444 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 EIF3HO15372 352 aaKnown RBP eCLIP15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 ZNF217O75362 1048 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 CRTAMO95727 393 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 AVPR2P30518 371 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 PTPRCAPQ14761 206 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 TMEM52BQ4KMG9 183 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 LIPIQ6XZB0 460 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 ANKMY2Q8IV38 441 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 FRMD1Q8N878 549 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 FBXO36Q8NEA4 188 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 PPHLN1Q8NEY8 458 aaKnown RBP15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 LRRC39Q96DD0 335 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 EBNA1BP2Q99848 306 aaKnown RBP15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 KIFC1Q9BW19 673 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 BTBD1Q9H0C5 482 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 SOX13Q9UN79 622 aa15.82■□□□□ 0.12
CCDC90B-201ENST00000260054 AXIN1O15169 862 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms