RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 BTN3A1O00481 513 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 TRIM3O75382 744 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 LYPLA1O75608 230 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 FTH1P02794 183 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 ITGAVP06756 1048 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 RPL22P35268 128 aaKnown RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 S100A12P80511 92 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 ZNF517Q6ZMY9 492 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 CYP4V2Q6ZWL3 525 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 AHSA2Q719I0 299 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 CLYBLQ8N0X4 340 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 RPRD1AQ96P16 312 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 UNC93B1Q9H1C4 597 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 SAMD4AQ9UPU9 718 aaKnown RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 FAM237AA0A1B0GTK4 181 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 H0Y858 1186 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 H3BSA7 217 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 AP3D1O14617 1153 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 RNASEH1O60930 286 aaKnown RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 OR5F1O95221 314 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 PGLSO95336 258 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 NTRK1P04629 796 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 SLC15A1P46059 708 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 BCAT1P54687 386 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 PTPN11Q06124 597 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 SLC1A5Q15758 541 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 AADACL2Q6P093 401 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 UNC5AQ6ZN44 842 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 C10orf107Q8IVU9 208 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 OR6J1Q8NGC5 347 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 CGRRF1Q99675 332 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 SEMA4BQ9NPR2 832 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 OPTCQ9UBM4 332 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 CFL2Q9Y281 166 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 PLLPQ9Y342 182 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 HSPB11Q9Y547 144 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 NCANO14594 1321 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 H3BM21 787 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 AMPD1P23109 780 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 PFKFB4Q16877 469 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 IER5Q5VY09 327 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 GPSM1Q86YR5 675 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 SPPL2CQ8IUH8 684 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 TEFMQ96QE5 360 aaKnown RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 RIOX1Q9H6W3 641 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 CAPN10Q9HC96 672 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 DDX43Q9NXZ2 648 aaKnown RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 ST3GAL5Q9UNP4 418 aa13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 PIN4Q9Y237 131 aaKnown RBP13.19□□□□□ -0.3
PCDHGA3-201ENST00000253812 CCL15-CCL14A0A0B4J2E2 113 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 EFCAB9A8MZ26 197 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 TCEA3O75764 348 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 PEPDP12955 493 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 MTHFRP42898 656 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 RPL19P84098 196 aaKnown RBP13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 CCL15Q16663 113 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 FAM220AQ7Z4H9 259 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 RAET1EQ8TD07 263 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 CYP3A43Q9HB55 503 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 PIH1D1Q9NWS0 290 aaKnown RBP13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 TBC1D14Q9P2M4 693 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 ZMYM5Q9UJ78 669 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 PCDHA11Q9Y5I1 949 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 DCDC2CA8MYV0 355 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 TAL1P17542 331 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 CRATP43155 626 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 ALDH9A1P49189 494 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 ST8SIA6P61647 398 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 PON2Q15165 354 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 GLYATQ6IB77 296 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 APOBEC3HQ6NTF7 200 aaKnown RBP13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 DUS1LQ6P1R4 473 aaKnown RBP13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 SLC22A16Q86VW1 577 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 PTGR2Q8N8N7 351 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 COQ10BQ9H8M1 238 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 PRDM16Q9HAZ2 1276 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 DNAJC28Q9NX36 388 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 A0A087WZ62 844 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 TCRBV9S1A1TA0A576 114 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 PLSCR1O15162 318 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 CHST10O43529 356 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 CCNB1P14635 433 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 ARF4P18085 180 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 CLK2P49760 499 aaKnown RBP13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 ZNF157P51786 506 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 CYP24A1Q07973 514 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 EARS2Q5JPH6 523 aaKnown RBP13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 DACT2Q5SW24 774 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 RFWD3Q6PCD5 774 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 SH3RF1Q7Z6J0 888 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 PLEKHO2Q8TD55 490 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 EBNA1BP2Q99848 306 aaKnown RBP13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 ALG9Q9H6U8 611 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 ADGRE2Q9UHX3 823 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 U3KQV3 271 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 GRIN2DO15399 1336 aa13.18□□□□□ -0.3
PCDHGA3-201ENST00000253812 PDPK1O15530 556 aa13.17□□□□□ -0.3
PCDHGA3-201ENST00000253812 OR10H3O60404 316 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms